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Methods in Enzymology|July 28, 2020
Click chemistry-based amplification and detection of endogenous RNA and DNA molecules in situ using clampFISH probesSepideh Tavakoli, Yifang Liu, Jacob L Potts, et al.
Scientific Reports|May 10, 2020
Synergistic effect of graphene oxide and zoledronic acid for osteoporosis and cancer treatmentGökçen Boran, Sepideh Tavakoli, Ingo Dierking, et al.
Biorxiv : the Preprint Server for Biology|April 17, 2023
Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysisCaroline A McCormick, Stuart Akeson, Sepideh Tavakoli, et al.
Gigabyte (Hong Kong, China)|July 4, 2024
Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysisCaroline A McCormick, Stuart Akeson, Sepideh Tavakoli, et al.
Nature Communications|January 19, 2023
Semi-quantitative detection of pseudouridine modifications and type I/II hypermodifications in human mRNAs using direct long-read sequencingSepideh Tavakoli, Mohammad Nabizadeh, Amr Makhamreh, et al.
Scientific Reports|September 28, 2024
Nanopore signal deviations from pseudouridine modifications in RNA are sequence-specific: quantification requires dedicated synthetic controlsAmr Makhamreh, Sepideh Tavakoli, Ali Fallahi, et al.
Cell Systems|March 21, 2025
Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess epitranscriptome plasticity in a neuronal cell lineOleksandra Fanari, Sepideh Tavakoli, Yuchen Qiu, et al.
Biorxiv : the Preprint Server for Biology|April 8, 2024
Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess neuronal epitranscriptome plasticityOleksandra Fanari, Sepideh Tavakoli, Yuchen Qiu, et al.
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