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Journal of Mathematical Biology|July 23, 2014
Clades and clans: a comparison study of two evolutionary modelsSha Zhu, Cuong Than, Taoyang WuPlos Computational Biology|September 15, 2009
Species tree inference by minimizing deep coalescencesCuong Than, Luay NakhlehBMC Bioinformatics|July 30, 2008
PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationshipsCuong Than, Derek Ruths, Luay NakhlehBMC Bioinformatics|December 14, 2011
Structural properties of the reconciliation space and their applications in enumerating nearly-optimal reconciliations between a gene tree and a species treeTaoyang Wu, Louxin ZhangIEEE/ACM Transactions on Computational Biology and Bioinformatics|June 23, 2022
Planar Rooted Phylogenetic NetworksVincent Moulton, Taoyang WuJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 19, 2007
Confounding factors in HGT detection: statistical error, coalescent effects, and multiple solutionsCuong Than, Derek Ruths, Hideki Innan, et al.Theoretical Population Biology|November 27, 2015
On joint subtree distributions under two evolutionary modelsTaoyang Wu, Kwok Pui ChoiIEEE/ACM Transactions on Computational Biology and Bioinformatics|October 5, 2013
On the neighborhoods of treesPeter J Humphries, Taoyang WuSystematic Biology|January 21, 2011
Coalescent histories on phylogenetic networks and detection of hybridization despite incomplete lineage sortingYun Yu, Cuong Than, James H Degnan, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|January 31, 2009
Refining phylogenetic trees given additional data: an algorithm based on parsimonyTaoyang Wu, Vincent Moulton, Mike SteelPageof 35