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Genome Biology and Evolution|August 2, 2011
Selection for translation efficiency on synonymous polymorphisms in recent human evolutionYedael Y Waldman, Tamir Tuller, Alon Keinan, et al.Proceedings of the National Academy of Sciences of the United States of America|February 6, 2010
Translation efficiency is determined by both codon bias and folding energyTamir Tuller, Yedael Y Waldman, Martin Kupiec, et al.Proceedings of the National Academy of Sciences of the United States of America|December 31, 2024
Predicting gene sequences with AI to study codon usage patternsTomer Sidi, Shir Bahiri-Elitzur, Tamir Tuller, et al.Bioinformatics (Oxford, England)|January 22, 2008
Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterionHadas Birin, Zohar Gal-Or, Isaac Elias, et al.BMC Bioinformatics|February 4, 2010
Comparative classification of species and the study of pathway evolution based on the alignment of metabolic pathwaysAdi Mano, Tamir Tuller, Oded Béjà, et al.Scientific Reports|December 4, 2020
Algorithms for ribosome traffic engineering and their potential in improving host cells' titer and growth rateHadas Zur, Rachel Cohen-Kupiec, Sophie Vinokour, et al.Journal of the Royal Society, Interface|March 11, 2016
A model for competition for ribosomes in the cellAlon Raveh, Michael Margaliot, Eduardo D Sontag, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 26, 2017
Controllability Analysis and Control Synthesis for the Ribosome Flow ModelYoram Zarai, Michael Margaliot, Eduardo D Sontag, et al.Cancer Research|November 6, 2009
TP53 cancerous mutations exhibit selection for translation efficiencyYedael Y Waldman, Tamir Tuller, Roded Sharan, et al.Plos Computational Biology|September 13, 2011
Genome-scale analysis of translation elongation with a ribosome flow modelShlomi Reuveni, Isaac Meilijson, Martin Kupiec, et al.Pageof 17