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Bioinformatics (Oxford, England)|July 29, 2006
Relative contributions of structural designability and functional diversity in molecular evolution of duplicatesBoris E ShakhnovichPlos Computational Biology|July 17, 2007
A first-principles model of early evolution: emergence of gene families, species, and preferred protein foldsKonstantin B Zeldovich, Peiqiu Chen, Boris E Shakhnovich, et al.Journal of Molecular Biology|January 28, 2003
Functional fingerprints of folds: evidence for correlated structure-function evolutionBoris E Shakhnovich, Nikolay V Dokholyan, Charles DeLisi, et al.Proceedings of the National Academy of Sciences of the United States of America|February 19, 2004
Imprint of evolution on protein structuresGuido Tiana, Boris E Shakhnovich, Nikolay V Dokholyan, et al.Journal of Molecular Biology|December 5, 2006
Structural similarity enhances interaction propensity of proteinsD B Lukatsky, B E Shakhnovich, J Mintseris, et al.Annual Review of Biophysics and Biomolecular Structure|May 8, 2001
Protein folding theory: from lattice to all-atom modelsL Mirny, E ShakhnovichBiophysical Journal|February 13, 2007
The mechanical unfolding of ubiquitin through all-atom Monte Carlo simulation with a Go-type potentialAriel Kleiner, Eugene ShakhnovichThe Journal of Physical Chemistry. B|May 10, 2021
Effect of RNA on Morphology and Dynamics of Membraneless OrganellesSrivastav Ranganathan, Eugene ShakhnovichJournal of Molecular Biology|May 1, 2001
Evolutionary conservation of the folding nucleusL Mirny, E ShakhnovichBiorxiv : the Preprint Server for Biology|April 16, 2025
The Origin of the Ionic-strength Dependent Reentrant Behavior in Liquid-Liquid Phase Separation of Neutral IDPsSayantan Mondal, Eugene ShakhnovichPageof 47