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Nucleic Acids Research|May 5, 2007
STAMP: a web tool for exploring DNA-binding motif similaritiesShaun Mahony, Panayiotis V BenosBioinformatics (Oxford, England)|July 25, 2007
Inferring protein-DNA dependencies using motif alignments and mutual informationShaun Mahony, Philip E Auron, Panayiotis V BenosPlos Computational Biology|April 3, 2007
DNA familial binding profiles made easy: comparison of various motif alignment and clustering strategiesShaun Mahony, Philip E Auron, Panayiotis V BenosBioinformatics (Oxford, England)|June 18, 2005
Improved detection of DNA motifs using a self-organized clustering of familial binding profilesShaun Mahony, Aaron Golden, Terry J Smith, et al.Genome Biology|May 18, 2007
Regulatory conservation of protein coding and microRNA genes in vertebrates: lessons from the opossum genomeShaun Mahony, David L Corcoran, Eleanor Feingold, et al.Neural Networks : the Official Journal of the International Neural Network Society|July 15, 2006
Self-organizing neural networks to support the discovery of DNA-binding motifsShaun Mahony, Panayiotis V Benos, Terry J Smith, et al.Genome Biology|July 26, 2007
Combined analysis reveals a core set of cycling genesYong Lu, Shaun Mahony, Panayiotis V Benos, et al.Nucleic Acids Research|May 25, 2013
ComiR: Combinatorial microRNA target prediction toolClaudia Coronnello, Panayiotis V BenosGigascience|May 22, 2026
New causal discovery algorithm over censored variables identifies subtype-specific drivers of breast cancer progressionTyler C Lovelace, Panayiotis V BenosBioinformatics (Oxford, England)|December 22, 2023
CellularPotts.jl: simulating multiscale cellular models in JuliaRobert W Gregg, Panayiotis V BenosPageof 21