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BMC Genomics
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January 7, 2026
Chromatin state dynamics during the Plasmodium falciparum intraerythrocytic development cycle
Alan S Brown, Manuel Llinás, Shaun Mahony
Biorxiv : the Preprint Server for Biology
|
September 5, 2025
Chromatin state dynamics during the <i>Plasmodium falciparum</i> intraerythrocytic development cycle
Alan S Brown, Manuel Llinás, Shaun Mahony
Plos Computational Biology
|
August 23, 2012
High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints
Yuchun Guo, Shaun Mahony, David K Gifford
Plos Computational Biology
|
October 20, 2017
Deconvolving sequence features that discriminate between overlapping regulatory annotations
Akshay Kakumanu, Silvia Velasco, Esteban Mazzoni, et al.
Bioinformatics (Oxford, England)
|
July 25, 2007
Inferring protein-DNA dependencies using motif alignments and mutual information
Shaun Mahony, Philip E Auron, Panayiotis V Benos
Plos Computational Biology
|
April 3, 2007
DNA familial binding profiles made easy: comparison of various motif alignment and clustering strategies
Shaun Mahony, Philip E Auron, Panayiotis V Benos
Biorxiv : the Preprint Server for Biology
|
September 25, 2023
Allo: Accurate allocation of multi-mapped reads enables regulatory element analysis at repeats
Alexis Morrissey, Jeffrey Shi, Daniela Q James, et al.
Genome Research
|
July 10, 2024
Accurate allocation of multimapped reads enables regulatory element analysis at repeats
Alexis Morrissey, Jeffrey Shi, Daniela Q James, et al.
Genome Biology
|
January 8, 2021
An interpretable bimodal neural network characterizes the sequence and preexisting chromatin predictors of induced transcription factor binding
Divyanshi Srivastava, Begüm Aydin, Esteban O Mazzoni, et al.
BMC Bioinformatics
|
April 9, 2004
Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models
Shaun Mahony, James O McInerney, Terry J Smith, et al.
Page
of 8
Search research articles
Search
Showing results (11-20 of 78) with videos related to
Sort By:
Page
of 8
BMC Genomics
|
January 7, 2026
Chromatin state dynamics during the Plasmodium falciparum intraerythrocytic development cycle
Alan S Brown, Manuel Llinás, Shaun Mahony
Biorxiv : the Preprint Server for Biology
|
September 5, 2025
Chromatin state dynamics during the <i>Plasmodium falciparum</i> intraerythrocytic development cycle
Alan S Brown, Manuel Llinás, Shaun Mahony
Plos Computational Biology
|
August 23, 2012
High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints
Yuchun Guo, Shaun Mahony, David K Gifford
Plos Computational Biology
|
October 20, 2017
Deconvolving sequence features that discriminate between overlapping regulatory annotations
Akshay Kakumanu, Silvia Velasco, Esteban Mazzoni, et al.
Bioinformatics (Oxford, England)
|
July 25, 2007
Inferring protein-DNA dependencies using motif alignments and mutual information
Shaun Mahony, Philip E Auron, Panayiotis V Benos
Plos Computational Biology
|
April 3, 2007
DNA familial binding profiles made easy: comparison of various motif alignment and clustering strategies
Shaun Mahony, Philip E Auron, Panayiotis V Benos
Biorxiv : the Preprint Server for Biology
|
September 25, 2023
Allo: Accurate allocation of multi-mapped reads enables regulatory element analysis at repeats
Alexis Morrissey, Jeffrey Shi, Daniela Q James, et al.
Genome Research
|
July 10, 2024
Accurate allocation of multimapped reads enables regulatory element analysis at repeats
Alexis Morrissey, Jeffrey Shi, Daniela Q James, et al.
Genome Biology
|
January 8, 2021
An interpretable bimodal neural network characterizes the sequence and preexisting chromatin predictors of induced transcription factor binding
Divyanshi Srivastava, Begüm Aydin, Esteban O Mazzoni, et al.
BMC Bioinformatics
|
April 9, 2004
Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models
Shaun Mahony, James O McInerney, Terry J Smith, et al.
Page
of 8