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Journal of Nucleic Acids|October 19, 2011
tRNA Modification and Genetic Code Variations in Animal MitochondriaKimitsuna Watanabe, Shin-Ichi YokoboriJournal of Molecular Evolution|July 17, 2015
Evolution of Eukaryotic DNA Polymerases via Interaction Between Cells and Large DNA VirusesMasaharu Takemura, Shin-ichi Yokobori, Hiroyuki OgataMolecular Phylogenetics and Evolution|December 28, 2004
Complete nucleotide sequence of the mitochondrial genome of Doliolum nationalis with implications for evolution of urochordatesShin-ichi Yokobori, Tairo Oshima, Hiroshi WadaJournal of Molecular Evolution|January 24, 2004
Mitochondrial genome of Ciona savignyi (Urochordata, Ascidiacea, Enterogona): comparison of gene arrangement and tRNA genes with Halocynthia roretzi mitochondrial genomeShin-ichi Yokobori, Yukari Watanabe, Tairo OshimaJournal of Molecular Evolution|July 9, 2026
Resurrecting tRNAs of the Last Universal Common Ancestor (Commonote) Toward Rebuilding the Ancient Translation SystemKei Yamanouchi, Hinata Moriya, Shin-Ichi YokoboriExtremophiles : Life Under Extreme Conditions|February 24, 2006
Structural analysis of the plasmid pTA1 isolated from the thermoacidophilic archaeon Thermoplasma acidophilumKan Yamashiro, Shin-Ichi Yokobori, Tairo Oshima, et al.Journal of Molecular Biology|November 29, 2005
Designing thermostable proteins: ancestral mutants of 3-isopropylmalate dehydrogenase designed by using a phylogenetic treeKeiko Watanabe, Takatoshi Ohkuri, Shin-ichi Yokobori, et al.Protein Engineering, Design & Selection : PEDS|April 22, 2010
Improvement of Bacillus circulans beta-amylase activity attained using the ancestral mutation methodKan Yamashiro, Shin-ichi Yokobori, Satoshi Koikeda, et al.Protein Engineering, Design & Selection : PEDS|April 11, 2015
Ancestral amino acid substitution improves the thermal stability of recombinant lignin-peroxidase from white-rot fungi, Phanerochaete chrysosporium strain UAMH 3641Yasuyuki Semba, Manabu Ishida, Shin-ichi Yokobori, et al.Nucleic Acids Research|May 10, 2013
Life without tRNAArg-adenosine deaminase TadA: evolutionary consequences of decoding the four CGN codons as arginine in Mycoplasmas and other MollicutesShin-ichi Yokobori, Aya Kitamura, Henri Grosjean, et al.Pageof 7