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Bioinformatics (Oxford, England)|July 12, 2021
Umibato: estimation of time-varying microbial interaction using continuous-time regression hidden Markov modelShion Hosoda, Tsukasa Fukunaga, Michiaki Hamada
Bioinformatics (Oxford, England)|September 10, 2024
Prediction of antibiotic resistance mechanisms using a protein language modelKanami Yagimoto, Shion Hosoda, Miwa Sato, et al.
Microbiome|June 25, 2020
Revealing the microbial assemblage structure in the human gut microbiome using latent Dirichlet allocationShion Hosoda, Suguru Nishijima, Tsukasa Fukunaga, et al.
Computational and Structural Biotechnology Journal|November 13, 2023
Probiotic responder identification in cross-over trials for constipation using a Bayesian statistical model considering lags between intake and effect periodsShion Hosoda, Yuichiro Nishimoto, Yohsuke Yamauchi, et al.
BMC Bioinformatics|September 10, 2024
BayesianSSA: a Bayesian statistical model based on structural sensitivity analysis for predicting responses to enzyme perturbations in metabolic networksShion Hosoda, Hisashi Iwata, Takuya Miura, et al.
Computational and Structural Biotechnology Journal|June 18, 2021
Representation learning applications in biological sequence analysisHitoshi Iuchi, Taro Matsutani, Keisuke Yamada, et al.
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