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Methods in Molecular Biology (Clifton, N.J.)|June 25, 2022
MuSE: A Novel Approach to Mutation Calling with Sample-Specific Error ModelingShuangxi Ji, Matthew D Montierth, Wenyi WangGenome Research|April 8, 2024
Accelerated somatic mutation calling for whole-genome and whole-exome sequencing data from heterogenous tumor samplesShuangxi Ji, Tong Zhu, Ankit Sethia, et al.Biorxiv : the Preprint Server for Biology|July 18, 2023
Accelerated somatic mutation calling for whole-genome and whole-exome sequencing data from heterogenous tumor samplesShuangxi Ji, Tong Zhu, Ankit Sethia, et al.Journal of Magnetic Resonance Imaging : JMRI|October 2, 2012
Automatic segmentation of white matter hyperintensities by an extended FitzHugh & Nagumo reaction diffusion modelShuangxi Ji, Changqing Ye, Fan Li, et al.Plos One|January 9, 2019
DeepCDpred: Inter-residue distance and contact prediction for improved prediction of protein structureShuangxi Ji, Tuğçe Oruç, Liam Mead, et al.Magnetic Resonance in Medicine|January 3, 2013
Turbo fast three-dimensional carotid artery black-blood MRI by combining three-dimensional MERGE sequence with compressed sensingBo Li, Li Dong, Bin Chen, et al.Proceedings of the National Academy of Sciences of the United States of America|February 7, 2013
Kissing and nanotunneling mediate intermitochondrial communication in the heartXiaohu Huang, Lei Sun, Shuangxi Ji, et al.The Biochemical Journal|February 21, 2019
Structure of SPH (self-incompatibility protein homologue) proteins: a widespread family of small, highly stable, secreted proteinsKarthik V Rajasekar, Shuangxi Ji, Rachel J Coulthard, et al.Biorxiv : the Preprint Server for Biology|May 18, 2026
Tumor cell specific total mRNA expression informed neural networks predicts cancer progressionAnkita Paul, Jessica C Lal, Shuangxi Ji, et al.Cell Reports. Medicine|February 18, 2026
Tumor microenvironment transcriptional activity enables robust stratification of chemotherapy response in triple-negative breast cancerYaoyi Dai, Xiaoxi Pan, Shuai Guo, et al.Pageof 2