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Biorxiv : the Preprint Server for Biology|June 4, 2026
Sequence-based Drug-Target Binding Site Pre-training Enables Cryptic Pocket Detection and Improves Binding Affinity and Kinetics PredictionShuo Zhang, Li Xie, Daniel Tiourine, et al.
Nature Machine Intelligence|January 15, 2026
Multimodal out-of-distribution individual uncertainty quantification enhances binding affinity prediction for polypharmacologyAmitesh Badkul, Li Xie, Shuo Zhang, et al.
Biorxiv : the Preprint Server for Biology|March 10, 2025
MolGene-E: Inverse Molecular Design to Modulate Single Cell TranscriptomicsRahul Ohlan, Raswanth Murugan, Li Xie, et al.
IJCAI : Proceedings of the Conference|August 13, 2020
Improving Attention Mechanism in Graph Neural Networks via Cardinality PreservationShuo Zhang, Lei Xie
Scientific Reports|November 6, 2023
A universal framework for accurate and efficient geometric deep learning of molecular systemsShuo Zhang, Yang Liu, Lei Xie
International Journal of Molecular Sciences|July 20, 2019
Pathway-Centric Structure-Based Multi-Target Compound Screening for Anti-Virulence Drug RepurposingLi Xie, Lei Xie
Frontiers in Genetics|February 18, 2020
Heterogeneous Multi-Layered Network Model for Omics Data Integration and AnalysisBohyun Lee, Shuo Zhang, Aleksandar Poleksic, et al.
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