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Shushan Toneyan

Showing results (1-10 of 13) with videos related to

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Biorxiv : the Preprint Server for Biology|July 18, 2023
Interpreting <i>Cis</i>-Regulatory Interactions from Large-Scale Deep Neural Networks for GenomicsShushan Toneyan, Peter K Koo
Nature Genetics|September 16, 2024
Interpreting cis-regulatory interactions from large-scale deep neural networksShushan Toneyan, Peter K Koo
Nature Genetics|November 30, 2023
Current approaches to genomic deep learning struggle to fully capture human genetic variationZiqi Tang, Shushan Toneyan, Peter K Koo
Nature Machine Intelligence|June 16, 2023
Evaluating deep learning for predicting epigenomic profilesShushan Toneyan, Ziqi Tang, Peter K Koo
Genome Biology|May 4, 2023
EvoAug: improving generalization and interpretability of genomic deep neural networks with evolution-inspired data augmentationsNicholas Keone Lee, Ziqi Tang, Shushan Toneyan, et al.
Nucleic Acids Research|February 18, 2025
Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing dataLingjie Liu, Yixin Zhao, Rebecca Hassett, et al.
Bioinformatics (Oxford, England)|August 12, 2021
Deconvolution of expression for nascent RNA-sequencing data (DENR) highlights pre-RNA isoform diversity in human cellsYixin Zhao, Noah Dukler, Gilad Barshad, et al.
Nucleic Acids Research|February 19, 2025
Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing dataLingjie Liu, Yixin Zhao, Rebecca Hassett, et al.
Proceedings of Machine Learning Research|May 19, 2023
Selecting deep neural networks that yield consistent attribution-based interpretations for genomicsAntonio Majdandzic, Chandana Rajesh, Amber Tang, et al.
Biorxiv : the Preprint Server for Biology|May 10, 2023
Analysis of single-cell CRISPR perturbations indicates that enhancers act multiplicatively and provides limited evidence for epistatic-like interactionsJessica Zhou, Karthik Guruvayurappan, Shushan Toneyan, et al.
Pageof 2

Showing results (1-10 of 13) with videos related to

Sort By:
Pageof 2
Biorxiv : the Preprint Server for Biology|July 18, 2023
Interpreting <i>Cis</i>-Regulatory Interactions from Large-Scale Deep Neural Networks for GenomicsShushan Toneyan, Peter K Koo
Nature Genetics|September 16, 2024
Interpreting cis-regulatory interactions from large-scale deep neural networksShushan Toneyan, Peter K Koo
Nature Genetics|November 30, 2023
Current approaches to genomic deep learning struggle to fully capture human genetic variationZiqi Tang, Shushan Toneyan, Peter K Koo
Nature Machine Intelligence|June 16, 2023
Evaluating deep learning for predicting epigenomic profilesShushan Toneyan, Ziqi Tang, Peter K Koo
Genome Biology|May 4, 2023
EvoAug: improving generalization and interpretability of genomic deep neural networks with evolution-inspired data augmentationsNicholas Keone Lee, Ziqi Tang, Shushan Toneyan, et al.
Nucleic Acids Research|February 18, 2025
Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing dataLingjie Liu, Yixin Zhao, Rebecca Hassett, et al.
Bioinformatics (Oxford, England)|August 12, 2021
Deconvolution of expression for nascent RNA-sequencing data (DENR) highlights pre-RNA isoform diversity in human cellsYixin Zhao, Noah Dukler, Gilad Barshad, et al.
Nucleic Acids Research|February 19, 2025
Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing dataLingjie Liu, Yixin Zhao, Rebecca Hassett, et al.
Proceedings of Machine Learning Research|May 19, 2023
Selecting deep neural networks that yield consistent attribution-based interpretations for genomicsAntonio Majdandzic, Chandana Rajesh, Amber Tang, et al.
Biorxiv : the Preprint Server for Biology|May 10, 2023
Analysis of single-cell CRISPR perturbations indicates that enhancers act multiplicatively and provides limited evidence for epistatic-like interactionsJessica Zhou, Karthik Guruvayurappan, Shushan Toneyan, et al.
Pageof 2