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Microbiological Research|August 29, 2009
Variable correlation of genome GC% with transfer RNA number as well as with transfer RNA diversity among bacterial groups: alpha-proteobacteria and tenericutes exhibit strong positive correlationSiddhartha Sankar Satapathy, Malay Dutta, Suvendra Kumar RayMicrobiological Research|February 23, 2010
Higher tRNA diversity in thermophilic bacteria: a possible adaptation to growth at high temperatureSiddhartha Sankar Satapathy, Malay Dutta, Suvendra Kumar RayGenes to Cells : Devoted to Molecular & Cellular Mechanisms|August 23, 2022
Machine learning approach identifies prominent codons from different degenerate groups influencing gene expression in bacteriaPiyali Sen, Annushree Kurmi, Suvendra Kumar Ray, et al.Journal of Molecular Evolution|October 12, 2012
Transfer RNA gene numbers may not be completely responsible for the codon usage bias in asparagine, isoleucine, phenylalanine, and tyrosine in the high expression genes in bacteriaSiddhartha Sankar Satapathy, Malay Dutta, Alak Kumar Buragohain, et al.Peerj|April 26, 2024
High frequency of transition to transversion ratio in the stem region of RNA secondary structure of untranslated region of SARS-CoV-2Madhusmita Dash, Preetisudha Meher, Aditya Kumar, et al.Genes to Cells : Devoted to Molecular & Cellular Mechanisms|February 11, 2017
Codon degeneracy and amino acid abundance influence the measures of codon usage bias: improved Nc (N̂c ) and ENCprime (N̂'c ) measuresSiddhartha Sankar Satapathy, Ajit Kumar Sahoo, Suvendra Kumar Ray, et al.DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes|July 19, 2016
Discrepancy among the synonymous codons with respect to their selection as optimal codon in bacteriaSiddhartha Sankar Satapathy, Bhesh Raj Powdel, Alak Kumar Buragohain, et al.Molecular Genetics and Genomics : MGG|July 26, 2024
Differentially used codons among essential genes in bacteria identified by machine learning-based analysisAnnushree Kurmi, Piyali Sen, Madhusmita Dash, et al.Journal of Molecular Evolution|November 26, 2013
Selection on GGU and CGU codons in the high expression genes in bacteriaSiddhartha Sankar Satapathy, Bhesh Raj Powdel, Malay Dutta, et al.Gene|December 17, 2013
Constraint on di-nucleotides by codon usage bias in bacterial genomesSiddhartha Sankar Satapathy, Bhes Raj Powdel, Malay Dutta, et al.Pageof 2