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Bioinformatics Advances|October 30, 2024
motifbreakR v2: expanded variant analysis including indels and integrated evidence from transcription factor binding databasesSimon G Coetzee, Dennis J Hazelett
Arxiv|July 16, 2024
MotifbreakR v2: extended capability and database integrationSimon G Coetzee, Dennis J Hazelett
Bioinformatics (Oxford, England)|August 15, 2015
motifbreakR: an R/Bioconductor package for predicting variant effects at transcription factor binding sitesSimon G Coetzee, Gerhard A Coetzee, Dennis J Hazelett
Biodata Mining|January 15, 2025
Genome-wide association studies are enriched for interacting genesPeter T Nguyen, Simon G Coetzee, Irina Silacheva, et al.
Research Square|November 6, 2024
Genome wide association studies are enriched for interacting genesPeter T Nguyen, Simon G Coetzee, Irina Silacheva, et al.
Iscience|October 6, 2021
A molecular taxonomy of tumors independent of tissue-of-originPeter T Nguyen, Simon G Coetzee, Daniel L Lakeland, et al.
Scientific Reports|July 28, 2016
Enrichment of risk SNPs in regulatory regions implicate diverse tissues in Parkinson's disease etiologySimon G Coetzee, Steven Pierce, Patrik Brundin, et al.
BMC Genomics|June 3, 2014
Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cellsSuhn Kyong Rhie, Dennis J Hazelett, Simon G Coetzee, et al.
Bioinformatics (Oxford, England)|April 8, 2025
Rethinking GWAS: how lessons from genetic screens and artificial intelligence could reveal biological mechanismsDennis J Hazelett
Bioinformatics (Oxford, England)|October 27, 2018
ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profilesTiago C Silva, Simon G Coetzee, Nicole Gull, et al.
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