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Molecular Biology and Evolution|June 30, 2010
The prevalence of multifurcations in tree-space and their implications for tree-searchSimon Whelan, Daniel MoneySystematic Biology|July 6, 2014
Maximum likelihood inference of small trees in the presence of long branchesSarah L Parks, Nick GoldmanNAR Genomics and Bioinformatics|September 19, 2024
A generalized protein identification method for novel and diverse sequencing technologiesBikash Kumar Bhandari, Nick GoldmanMolecular Biology and Evolution|January 23, 2019
Physicochemical Amino Acid Properties Better Describe Substitution Rates in Large PopulationsClaudia C Weber, Simon WhelanMolecular Biology and Evolution|November 13, 2012
Class of multiple sequence alignment algorithm affects genomic analysisBenjamin P Blackburne, Simon WhelanMethods in Molecular Biology (Clifton, N.J.)|November 30, 2016
Inferring TreesSimon Whelan, David A MorrisonBioinformatics (Oxford, England)|December 27, 2011
Measuring the distance between multiple sequence alignmentsBenjamin P Blackburne, Simon WhelanGenome Biology and Evolution|January 7, 2014
Assessing the state of substitution models describing noncoding RNA evolutionJames E Allen, Simon WhelanMolecular Biology and Evolution|April 3, 2007
An empirical codon model for protein sequence evolutionCarolin Kosiol, Ian Holmes, Nick GoldmanSystematic Biology|June 9, 2017
More on the Best Evolutionary Rate for Phylogenetic AnalysisSeraina Klopfstein, Tim Massingham, Nick GoldmanPageof 12