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Proceedings of the National Academy of Sciences of the United States of America|September 12, 2019
Structural basis for power stroke vs. Brownian ratchet mechanisms of motor proteinsWonmuk Hwang, Martin KarplusJournal of Molecular Biology|September 6, 2005
Large amplitude conformational change in proteins explored with a plastic network model: adenylate kinasePaul Maragakis, Martin KarplusThe Journal of Physical Chemistry. B|February 24, 2006
Two-metal-ion mechanism for hammerhead-ribozyme catalysisFabrice Leclerc, Martin KarplusJournal of the American Chemical Society|March 21, 2002
Quantum mechanics/molecular mechanics studies of triosephosphate isomerase-catalyzed reactions: effect of geometry and tunneling on proton-transfer rate constantsQiang Cui, Martin KarplusThe Journal of Physical Chemistry. B|May 31, 2011
Determining the conformational change that accompanies donor-acceptor distance fluctuations: an umbrella sampling analysisGuobin Luo, Martin KarplusThe Journal of Chemical Physics|May 10, 2014
Investigations of α-helix↔β-sheet transition pathways in a miniprotein using the finite-temperature string methodVictor Ovchinnikov, Martin KarplusMolecular Aspects of Medicine|November 10, 2021
The functional role of the hemoglobin-water interfaceMarkus Meuwly, Martin KarplusThe Journal of Physical Chemistry. B|March 14, 2012
Analysis and elimination of a bias in targeted molecular dynamics simulations of conformational transitions: application to calmodulinVictor Ovchinnikov, Martin KarplusProceedings of the National Academy of Sciences of the United States of America|July 26, 2019
Insights into the origin of the high energy-conversion efficiency of F<sub>1</sub>-ATPaseKwangho Nam, Martin KarplusProtein Science : a Publication of the Protein Society|June 19, 2008
Allostery and cooperativity revisitedQiang Cui, Martin KarplusPageof 17