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Biophysical Journal|March 1, 2003
DNA polymorphism: a comparison of force fields for nucleic acidsSwarnalatha Y Reddy, Fabrice Leclerc, Martin KarplusThe Journal of Physical Chemistry. B|July 21, 2006
Potential energy surface and molecular dynamics of MbNO: existence of an unsuspected FeON minimumDavid R Nutt, Martin Karplus, Markus MeuwlyThe Journal of Chemical Physics|March 3, 2011
Free energy of conformational transition paths in biomolecules: the string method and its application to myosin VIVictor Ovchinnikov, Martin Karplus, Eric Vanden-EijndenThe Journal of Chemical Physics|July 23, 2004
Chaperoned alchemical free energy simulations: a general method for QM, MM, and QM/MM potentialsWei Yang, Ryan Bitetti-Putzer, Martin KarplusJournal of the American Chemical Society|June 24, 2004
The origin of protein sidechain order parameter distributionsRobert B Best, Jane Clarke, Martin KarplusThe Journal of Chemical Physics|November 13, 2004
Calculation of the aqueous solvation energy and entropy, as well as free energy, of simple polar solutesShunzhou Wan, Roland H Stote, Martin KarplusJournal of the American Chemical Society|December 8, 2009
Analysis of an anomalous mutant of MutM DNA glycosylase leads to new insights into the catalytic mechanismKwangho Nam, Gregory L Verdine, Martin KarplusJournal of Molecular Biology|October 27, 2009
Mechanical coupling in myosin V: a simulation studyVictor Ovchinnikov, Bernhardt L Trout, Martin KarplusBiophysical Journal|July 1, 2026
Anisotropic unbinding and location-dependent hovering of a kinesin motor head over microtubuleWonmuk Hwang, Matthew J Lang, Martin KarplusStructure (London, England : 1993)|September 11, 2002
Translocation mechanism of long sugar chains across the maltoporin membrane channelRaimund Dutzler, Tilman Schirmer, Martin Karplus, et al.Pageof 17