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Nature Chemical Biology|January 6, 2025
E2-Ub-R74G strategy reveals E2-specific ubiquitin conjugation profiles in live cellsSiqi Shen, Hang YinGenome Biology|October 17, 2022
Normalization and de-noising of single-cell Hi-C data with BandNorm and scVI-3DYe Zheng, Siqi Shen, Sündüz KeleşBioinformatics (Oxford, England)|June 2, 2022
scGAD: single-cell gene associating domain scores for exploratory analysis of scHi-C dataSiqi Shen, Ye Zheng, Sündüz KeleşJournal of the American Chemical Society|November 3, 2020
Photocaged Cell-Permeable Ubiquitin Probe for Temporal Profiling of Deubiquitinating EnzymesWeijun Gui, Siqi Shen, Zhihao ZhuangBioinformatics (Oxford, England)|April 2, 2023
AdaLiftOver: high-resolution identification of orthologous regulatory elements with Adaptive liftOverChenyang Dong, Siqi Shen, Sündüz KeleşFood & Function|June 3, 2024
The neuroprotective effects of SFGDI on sirtuin 3-related oxidative stress by regulating the Sirt3/SOD/ROS pathway and energy metabolism in BV2 cellsZhiqiang Lu, Siqi Shen, Songyi LinInternational Journal of Environmental Research and Public Health|February 7, 2020
Adsorption Characteristics of Oxytetracycline by Different Fractions of the Organic Matter from Humus Soil: Insight from Internal Structure and CompositionMengya Luo, Shengke Yang, Siqi Shen, et al.Nucleic Acids Research|August 14, 2021
Photo-activatable Ub-PCNA probes reveal new structural features of the Saccharomyces cerevisiae Polη/PCNA complexSiqi Shen, Gregory A Davidson, Kun Yang, et al.Breast Cancer Research : BCR|July 16, 2014
Ubiquitin-conjugating enzyme complex Uev1A-Ubc13 promotes breast cancer metastasis through nuclear factor-кB mediated matrix metalloproteinase-1 gene regulationZhaojia Wu, Siqi Shen, Zhiling Zhang, et al.IEEE Computer Graphics and Applications|October 10, 2022
IEEE VAST Challenge 2021 Winner: Visual Analytics for Spatial-Temporal Situation AwarenessSiqi Shen, Xingui Lai, Siming Chen, et al.Pageof 5