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Biophysical Journal|December 15, 2023
Data-driven prediction of αIIbβ3 integrin activation paths using manifold learning and deep generative modelingSiva Dasetty, Tamara C Bidone, Andrew L FergusonBiophysical Journal|August 20, 2025
Prediction of αIIbβ3 integrin structures along its minimum free energy activation pathwaySiva Dasetty, Robert E Coffman, Tamara C Bidone, et al.Biophysical Journal|January 18, 2025
Data-driven equation-free dynamics applied to many-protein complexes: The microtubule tip relaxationJiangbo Wu, Siva Dasetty, Daniel Beckett, et al.Journal of Chemical Theory and Computation|December 27, 2023
Permutationally Invariant Networks for Enhanced Sampling (PINES): Discovery of Multimolecular and Solvent-Inclusive Collective VariablesNicholas S M Herringer, Siva Dasetty, Diya Gandhi, et al.The Journal of Physical Chemistry. B|March 4, 2021
Advancing Rational Control of Peptide-Surface ComplexesSiva Dasetty, Sapna SarupriaInternational Journal of Molecular Sciences|June 27, 2024
Application of Funnel Metadynamics to the Platelet Integrin αIIbβ3 in Complex with an RGD PeptideRobert E Coffman, Tamara C BidoneCurrent Opinion in Structural Biology|March 22, 2023
Multiscale models of integrins and cellular adhesionsTamara C Bidone, David J OddeSoft Matter|February 22, 2019
Adsorption of amino acids on graphene: assessment of current force fieldsSiva Dasetty, John K Barrows, Sapna SarupriaJournal of the Royal Society, Interface|February 15, 2023
A parametric blueprint for optimum cochlear outer hair cell designRichard D Rabbitt, Tamara C BidoneCytoskeleton (Hoboken, N.J.)|November 6, 2015
Computational model of polarized actin cables and cytokinetic actin ring formation in budding yeastHaosu Tang, Tamara C Bidone, Dimitrios VavylonisPageof 15