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Bioinformatics (Oxford, England)|April 9, 2005
Rapid and selective surveillance of Arabidopsis thaliana genome annotations with CentrifugeFlorence Armand, Philipp Bucher, C Victor Jongeneel, et al.
Peerj|August 8, 2018
Detection and benchmarking of somatic mutations in cancer genomes using RNA-seq dataAlexandre Coudray, Anna M Battenhouse, Philipp Bucher, et al.
Nucleic Acids Research|November 5, 2019
EPD in 2020: enhanced data visualization and extension to ncRNA promotersPatrick Meylan, René Dreos, Giovanna Ambrosini, et al.
Molecular and Cellular Biology|January 11, 2012
RNA profiling and chromatin immunoprecipitation-sequencing reveal that PTF1a stabilizes pancreas progenitor identity via the control of MNX1/HLXB9 and a network of other transcription factorsNancy Thompson, Emilie Gésina, Peter Scheinert, et al.
Bioinformatics (Oxford, England)|May 10, 2014
Probabilistic partitioning methods to find significant patterns in ChIP-Seq dataNishanth Ulhas Nair, Sunil Kumar, Bernard M E Moret, et al.
Nucleic Acids Research|December 19, 2003
The Eukaryotic Promoter Database EPD: the impact of in silico primer extensionChristoph D Schmid, Viviane Praz, Mauro Delorenzi, et al.
BMC Genomics|November 2, 2007
Vertebrate conserved non coding DNA regions have a high persistence length and a short persistence timeDorota Retelska, Emmanuel Beaudoing, Cédric Notredame, et al.
Nucleic Acids Research|October 26, 2017
MGA repository: a curated data resource for ChIP-seq and other genome annotated dataRené Dréos, Giovanna Ambrosini, Romain Groux, et al.
Nucleic Acids Research|December 1, 2016
The eukaryotic promoter database in its 30th year: focus on non-vertebrate organismsRené Dreos, Giovanna Ambrosini, Romain Groux, et al.
BMC Genomics|July 14, 2006
Similarities and differences of polyadenylation signals in human and flyDorota Retelska, Christian Iseli, Philipp Bucher, et al.
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