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Genome Medicine|October 13, 2021
Intra-patient stability of tumor mutational burden from tissue biopsies at different time points in advanced cancersTimothy V Pham, Aaron M Goodman, Smruthy Sivakumar, et al.
Bioinformatics (Oxford, England)|June 12, 2016
Rapid and powerful detection of subtle allelic imbalance from exome sequencing data with hapLOHseqF Anthony San Lucas, Smruthy Sivakumar, Selina Vattathil, et al.
Genetics|March 8, 2021
Pan cancer patterns of allelic imbalance from chromosomal alterations in 33 tumor typesSmruthy Sivakumar, F Anthony San Lucas, Yasminka A Jakubek, et al.
Breast Cancer Research : BCR|July 2, 2025
Retrospective comparison between breast cancer tissue- and blood-based next-generation sequencing results in detection of PIK3CA, AKT1, and PTEN alterationsMoumita Chaki, Mona Benrashid, Subir Puri, et al.
The Oncologist|August 17, 2023
Increased KRAS G12C Prevalence, High Tumor Mutational Burden, and Specific Mutational Signatures Are Associated With MUTYH Mutations: A Pan-Cancer AnalysisUmut Disel, Smruthy Sivakumar, Tim Pham, et al.
Medrxiv : the Preprint Server for Health Sciences|June 30, 2025
Clinicogenomic landscape and function of <i>PIK3CA</i> , <i>AKT1</i> , and <i>PTEN</i> mutations in breast cancerJacqueline J Tao, Saumya D Sisoudiya, Hanna Tukachinsky, et al.
Biorxiv : the Preprint Server for Biology|May 4, 2026
Tissue-Specific Prevalence and Clonal Architecture of <i>BRCA1/2</i> LOH-Inducing Chromosomal AneuploidyXinfeng Wang, Saumya D Sisoudiya, Mahad Bihie, et al.
JCO Precision Oncology|April 9, 2026
Clinicogenomic Landscape and Function of <i>PIK3CA</i>, <i>AKT1</i>, and <i>PTEN</i> Mutations in Breast CancerJacqueline J Tao, Saumya D Sisoudiya, Hanna Tukachinsky, et al.
BMC Bioinformatics|January 6, 2018
Strategies for identification of somatic variants using the Ion Torrent deep targeted sequencing platformAditya Deshpande, Wenhua Lang, Tina McDowell, et al.
Lung Cancer (Amsterdam, Netherlands)|September 13, 2023
Liquid biopsy comprehensive genomic profiling of lung cancer in the Italian population: A real-world experienceCamilla Porta, Lorenzo Pradelli, Emilia Sicari, et al.
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