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ACM Transactions on Mathematical Software. Association for Computing Machinery|October 21, 2014
Algorithm 937: MINRES-QLP for Symmetric and Hermitian Linear Equations and Least-Squares ProblemsSou-Cheng T Choi, Michael A Saunders
Journal of Microbiology & Biology Education|October 1, 2021
Inquiry-Driven Bioinformatics Laboratory Research Module: Metagenomic Study of Student Oral MicrobesChrystal Ho Pao, Sou-Cheng T Choi, Shu Yun Lok, et al.
SIAM Journal on Scientific Computing : a Publication of the Society for Industrial and Applied Mathematics|November 25, 2014
LSRN: A PARALLEL ITERATIVE SOLVER FOR STRONGLY OVER- OR UNDERDETERMINED SYSTEMSXiangrui Meng, Michael A Saunders, Michael W Mahoney
BMC Bioinformatics|August 1, 2013
Robust flux balance analysis of multiscale biochemical reaction networksYuekai Sun, Ronan M T Fleming, Ines Thiele, et al.
Journal of Theoretical Biology|June 28, 2016
Conditions for duality between fluxes and concentrations in biochemical networksRonan M T Fleming, Nikos Vlassis, Ines Thiele, et al.
Plos One|January 5, 2012
A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organismsSri Priya Ponnapalli, Michael A Saunders, Charles F Van Loan, et al.
BMC Systems Biology|January 11, 2019
DynamicME: dynamic simulation and refinement of integrated models of metabolism and protein expressionLaurence Yang, Ali Ebrahim, Colton J Lloyd, et al.
The Journal of Biological Chemistry|December 14, 2001
Dynamic regulation of cyclooxygenase-2 promoter activity by isoforms of CCAAT/enhancer-binding proteinsYing Zhu, Michael A Saunders, Howard Yeh, et al.
BMC Bioinformatics|September 24, 2016
solveME: fast and reliable solution of nonlinear ME modelsLaurence Yang, Ding Ma, Ali Ebrahim, et al.
Scientific Reports|November 19, 2016
Principles of proteome allocation are revealed using proteomic data and genome-scale modelsLaurence Yang, James T Yurkovich, Colton J Lloyd, et al.
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