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Journal of Molecular Modeling|October 30, 2014
Contribution of phenylalanine side chain intercalation to the TATA-box binding protein-DNA interaction: molecular dynamics and dispersion-corrected density functional theory studiesManas Mondal, Sanchita Mukherjee, Dhananjay BhattacharyyaBiophysical Journal|June 21, 2012
Self-complementarity within proteins: bridging the gap between binding and foldingSankar Basu, Dhananjay Bhattacharyya, Rahul BanerjeeJournal of Computer-Aided Molecular Design|May 29, 2014
Temperature effect on poly(dA).poly(dT): molecular dynamics simulation studies of polymeric and oligomeric constructsSanchita Mukherjee, Sangeeta Kundu, Dhananjay BhattacharyyaThe Journal of Physical Chemistry. B|July 21, 2006
Role of hydrogen bonds in protein-DNA recognition: effect of nonplanar amino groupsShayantani Mukherjee, Sudipta Majumdar, Dhananjay BhattacharyyaJournal of Computer-Aided Molecular Design|November 25, 2006
Conformational specificity of non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysisShayantani Mukherjee, Manju Bansal, Dhananjay BhattacharyyaJournal of Molecular Modeling|July 19, 2017
Melting of polymeric DNA double helix at elevated temperature: a molecular dynamics approachSangeeta Kundu, Sanchita Mukherjee, Dhananjay BhattacharyyaIndian Journal of Biochemistry & Biophysics|September 11, 2014
Applications of complementarity plot in error detection and structure validation of proteinsSankar Basu, Dhananjay Bhattacharyya, Rahul BanerjeeBMC Bioinformatics|May 25, 2011
Mapping the distribution of packing topologies within protein interiors shows predominant preference for specific packing motifsSankar Basu, Dhananjay Bhattacharyya, Rahul BanerjeeJournal of Biomolecular Structure & Dynamics|November 18, 2009
Changes in thermodynamic properties of DNA base pairs in protein-DNA recognitionSudipta Samanta, Jaydeb Chakrabarti, Dhananjay BhattacharyyaJournal of Biosciences|July 4, 2012
Effect of temperature on DNA double helix: An insight from molecular dynamics simulationSangeeta Kundu, Sanchita Mukherjee, Dhananjay BhattacharyyaPageof 28