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Biorxiv : the Preprint Server for Biology|April 17, 2026
Interpretable Antibody-Antigen Structural Interface Prediction via Adaptive Graph Learning and Cyclic TransferXing Liu, Jason Kantorow, Ashesh Kumar Chattopadhyay, et al.
Nature Communications|April 23, 2016
Structural correlates of affinity in fetal versus adult endplate nicotinic receptorsTapan Kumar Nayak, Srirupa Chakraborty, Wenjun Zheng, et al.
Biorxiv : the Preprint Server for Biology|March 31, 2025
Allosteric Control and Glycan Shielding Adaptations in the SARS-CoV-2 Spike from Early to Peak VirulenceSrirupa Chakraborty, Kien N Nguyen, Mingfei Zhao, et al.
Biophysical Journal|September 19, 2025
Spatial charge-hydrophobicity configuration modulates cationic peptide transport in cartilageBill Hakim, Timothy L Boyer, Srirupa Chakraborty, et al.
Viruses|June 2, 2021
Exploring the Role of Glycans in the Interaction of SARS-CoV-2 RBD and Human Receptor ACE2Kien Nguyen, Srirupa Chakraborty, Rachael A Mansbach, et al.
Biorxiv : the Preprint Server for Biology|August 4, 2020
The SARS-CoV-2 Spike Variant D614G Favors an Open Conformational StateRachael A Mansbach, Srirupa Chakraborty, Kien Nguyen, et al.
Proceedings of the National Academy of Sciences of the United States of America|November 26, 2014
Functional differences between neurotransmitter binding sites of muscle acetylcholine receptorsTapan K Nayak, Iva Bruhova, Srirupa Chakraborty, et al.
Science Advances|April 17, 2021
The SARS-CoV-2 Spike variant D614G favors an open conformational stateRachael A Mansbach, Srirupa Chakraborty, Kien Nguyen, et al.
Iscience|December 15, 2020
Quantification of the Resilience and Vulnerability of HIV-1 Native Glycan Shield at Atomistic DetailSrirupa Chakraborty, Zachary T Berndsen, Nicolas W Hengartner, et al.
Iscience|January 2, 2023
Network analysis uncovers the communication structure of SARS-CoV-2 spike protein identifying sites for immunogen designPedro D Manrique, Srirupa Chakraborty, Rory Henderson, et al.
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