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Cell Host & Microbe|July 9, 2021
HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogensWill Fischer, Elena E Giorgi, Srirupa Chakraborty, et al.Proceedings of the National Academy of Sciences of the United States of America|October 23, 2020
Visualization of the HIV-1 Env glycan shield across scalesZachary T Berndsen, Srirupa Chakraborty, Xiaoning Wang, et al.Biorxiv : the Preprint Server for Biology|April 10, 2026
Decoding epitope immunodominance in HIV Env using cryoEM and machine learningJan S Schuhmacher, Shuhao Xiao, Elise R Eray, et al.Nature Communications|December 11, 2025
Structural and immunological characterization of the H3 influenza hemagglutinin during antigenic driftRebeca de Paiva Froes Rocha, Ilhan Tomris, Charles A Bowman, et al.Plos Pathogens|May 3, 2022
A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequenceSarah Welbourn, Srirupa Chakraborty, Jie E Yang, et al.Nature Communications|September 6, 2022
Molecular insights into antibody-mediated protection against the prototypic simian immunodeficiency virusFangzhu Zhao, Zachary T Berndsen, Nuria Pedreño-Lopez, et al.Pageof 3