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Bioinformatics (Oxford, England)|August 20, 2016
Higher classification sensitivity of short metagenomic reads with CLARK-SRachid Ounit, Stefano LonardiNucleic Acids Research|April 23, 2025
MSTmap Online: enhanced usability, visualization, and accessibilityAmirsadra Mohseni, Stefano LonardiDrug Discovery Today|December 27, 2005
Storage and transmission of microarray imagesYu Luo, Stefano LonardiBMC Bioinformatics|October 17, 2021
Reference-agnostic representation and visualization of pan-genomesQihua Liang, Stefano LonardiBriefings in Bioinformatics|March 13, 2025
Predicting differentially methylated cytosines in TET and DNMT3 knockout mutants via a large language modelSaleh Sereshki, Stefano LonardiProceedings. IEEE Computational Systems Bioinformatics Conference|February 2, 2006
Gridding and compression of microarray imagesStefano Lonardi, Yu LuoInternational Journal of Data Mining and Bioinformatics|April 11, 2008
A parallel edge-betweenness clustering tool for Protein-Protein Interaction networksQiaofeng Yang, Stefano LonardiBiorxiv : the Preprint Server for Biology|September 16, 2024
Predicting Differentially Methylated Cytosines in TET and DNMT3 Knockout Mutants via a Large Language ModelSaleh Sereshki, Stefano LonardiBioinformatics (Oxford, England)|October 9, 2018
Accurate detection of chimeric contigs via Bionano optical mapsWeihua Pan, Stefano LonardiJournal of Bioinformatics and Computational Biology|December 18, 2008
A linear-time algorithm for predicting functional annotations from PPI networksYonghui Wu, Stefano LonardiPageof 16