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Computational Systems Bioinformatics. Computational Systems Bioinformatics Conference|August 1, 2009
On the accurate construction of consensus genetic mapsYonghui Wu, Timothy J Close, Stefano LonardiBioinformatics (Oxford, England)|May 7, 2016
BRAT-nova: fast and accurate mapping of bisulfite-treated readsElena Y Harris, Rachid Ounit, Stefano LonardiBioinformatics (Oxford, England)|June 15, 2015
De novo meta-assembly of ultra-deep sequencing dataHamid Mirebrahim, Timothy J Close, Stefano LonardiBMC Bioinformatics|July 17, 2009
A compartmentalized approach to the assembly of physical mapsSerdar Bozdag, Timothy J Close, Stefano LonardiBioinformatics (Oxford, England)|September 13, 2019
Selfish: discovery of differential chromatin interactions via a self-similarity measureAbbas Roayaei Ardakany, Ferhat Ay, Stefano LonardiJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|August 26, 2003
Monotony of surprise and large-scale quest for unusual wordsAlberto Apostolico, Mary Ellen Bock, Stefano LonardiComputational Systems Bioinformatics. Computational Systems Bioinformatics Conference|October 24, 2007
Efficient algorithms for genome-wide tagSNP selection across populations via the linkage disequilibrium criterionLan Liu, Yonghui Wu, Stefano Lonardi, et al.Journal of Chemical Information and Modeling|August 11, 2025
Predicting Antibody-Antigen Interactions with Structure-Aware LLMs: Insights from SARS-CoV-2 VariantsFaisal Bin Ashraf, Vinz Angelo Madrigal, Stefano LonardiACS Synthetic Biology|November 4, 2024
Balanced Training Sets Improve Deep Learning-Based Prediction of CRISPR sgRNA ActivityVarun Trivedi, Amirsadra Mohseni, Stefano Lonardi, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|January 19, 2010
Efficient genome-wide TagSNP selection across populations via the linkage disequilibrium criterionLan Liu, Yonghui Wu, Stefano Lonardi, et al.Pageof 16