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Computational Systems Bioinformatics. Computational Systems Bioinformatics Conference|October 24, 2007
Deconvoluting the BAC-gene relationships using a physical mapYonghui Wu, Lan Liu, Timothy J Close, et al.BMC Genomics|April 17, 2015
CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mersRachid Ounit, Steve Wanamaker, Timothy J Close, et al.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|January 31, 2008
A probabilistic method for small RNA flowgram matchingVladimir Vacic, Hailing Jin, Jian-Kang Zhu, et al.NAR Genomics and Bioinformatics|April 8, 2024
Properties and predicted functions of large genes and proteins of apicomplexan parasitesTiffany Fang, Amir Mohseni, Stefano Lonardi, et al.Bioinformatics (Oxford, England)|April 3, 2004
Efficient selection of unique and popular oligos for large EST databasesJie Zheng, Timothy J Close, Tao Jiang, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|January 19, 2010
Graphlet kernels for prediction of functional residues in protein structuresVladimir Vacic, Lilia M Iakoucheva, Stefano Lonardi, et al.Journal of Bioinformatics and Computational Biology|June 25, 2008
Deconvoluting BAC-gene relationships using a physical mapYonghui Wu, Lan Liu, Timothy J Close, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|October 10, 2015
FHAST: FPGA-Based Acceleration of Bowtie in HardwareEdward B Fernandez, Jason Villarreal, Stefano Lonardi, et al.Genome Biology|October 1, 2020
Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representationAbbas Roayaei Ardakany, Halil Tuvan Gezer, Stefano Lonardi, et al.Bioinformatics (Oxford, England)|June 13, 2012
NORMAL: accurate nucleosome positioning using a modified Gaussian mixture modelAnton Polishko, Nadia Ponts, Karine G Le Roch, et al.Pageof 16