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Nature Communications|February 18, 2022
Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolyticaDipankar Baisya, Adithya Ramesh, Cory Schwartz, et al.
BMC Bioinformatics|June 21, 2007
Composition Profiler: a tool for discovery and visualization of amino acid composition differencesVladimir Vacic, Vladimir N Uversky, A Keith Dunker, et al.
NAR Genomics and Bioinformatics|May 19, 2023
On the prediction of non-CG DNA methylation using machine learningSaleh Sereshki, Nathan Lee, Michalis Omirou, et al.
Plos Genetics|October 11, 2008
Efficient and accurate construction of genetic linkage maps from the minimum spanning tree of a graphYonghui Wu, Prasanna R Bhat, Timothy J Close, et al.
BMC Molecular Biology|January 16, 2008
Small RNAs and the regulation of cis-natural antisense transcripts in ArabidopsisHailing Jin, Vladimir Vacic, Thomas Girke, et al.
Bioinformatics (Oxford, England)|May 8, 2012
BRAT-BW: efficient and accurate mapping of bisulfite-treated readsElena Y Harris, Nadia Ponts, Karine G Le Roch, et al.
Plos Computational Biology|October 21, 2016
rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence ComparisonLars Hahn, Chris-André Leimeister, Rachid Ounit, et al.
BMC Bioinformatics|September 26, 2014
PuFFIN--a parameter-free method to build nucleosome maps from paired-end readsAnton Polishko, Evelien M Bunnik, Karine G Le Roch, et al.
Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases|August 17, 2010
Nucleosome occupancy at transcription start sites in the human malaria parasite: a hard-wired evolution of virulence?Nadia Ponts, Elena Y Harris, Stefano Lonardi, et al.
BMC Genomics|December 15, 2011
Chromatin-driven de novo discovery of DNA binding motifs in the human malaria parasiteElena Y Harris, Nadia Ponts, Karine G Le Roch, et al.
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