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Genomics, Proteomics & Bioinformatics|December 23, 2018
TICA: Transcriptional Interaction and Coregulation AnalyzerStefano Perna, Pietro Pinoli, Stefano Ceri, et al.
BMC Genomics|August 29, 2024
A comparative analysis of ENCODE and Cistrome in the context of TF binding signalStefano Perna, Pietro Pinoli, Stefano Ceri, et al.
Biology Direct|September 17, 2020
NAUTICA: classifying transcription factor interactions by positional and protein-protein interaction informationStefano Perna, Pietro Pinoli, Stefano Ceri, et al.
Methods in Molecular Biology (Clifton, N.J.)|July 22, 2018
Implementing a Transcription Factor Interaction Prediction System Using the GenoMetric Query LanguageStefano Perna, Arif Canakoglu, Pietro Pinoli, et al.
BMC Bioinformatics|May 16, 2021
Identifying collateral and synthetic lethal vulnerabilities within the DNA-damage responsePietro Pinoli, Sriganesh Srihari, Limsoon Wong, et al.
Methods (San Diego, Calif.)|September 18, 2016
Modeling and interoperability of heterogeneous genomic big data for integrative processing and queryingMarco Masseroli, Abdulrahman Kaitoua, Pietro Pinoli, et al.
BMC Bioinformatics|November 10, 2019
PyGMQL: scalable data extraction and analysis for heterogeneous genomic datasetsLuca Nanni, Pietro Pinoli, Arif Canakoglu, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|June 24, 2021
Predicting Drug Synergism by Means of Non-Negative Matrix Tri-FactorizationPietro Pinoli, Gaia Ceddia, Stefano Ceri, et al.
Biotech (Basel (Switzerland))|July 13, 2022
VirusLab: A Tool for Customized SARS-CoV-2 Data AnalysisPietro Pinoli, Anna Bernasconi, Anna Sandionigi, et al.
Computational and Structural Biotechnology Journal|August 10, 2022
Analysis of co-occurring and mutually exclusive amino acid changes and detection of convergent and divergent evolution events in SARS-CoV-2Ruba Al Khalaf, Anna Bernasconi, Pietro Pinoli, et al.
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