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Iscience|November 12, 2021
How many markers are needed to robustly determine a cell's type?Stephan Fischer, Jesse GillisIscience|February 2, 2022
Erratum: How many markers are needed to robustly determine a cell's type?Stephan Fischer, Jesse GillisBioinformatics (Oxford, England)|October 22, 2022
Defining the extent of gene function using ROC curvatureStephan Fischer, Jesse GillisNature Protocols|July 8, 2021
Scaling up reproducible research for single-cell transcriptomics using MetaNeighborStephan Fischer, Megan Crow, Benjamin D Harris, et al.Cell Systems|May 20, 2021
Single-cell co-expression analysis reveals that transcriptional modules are shared across cell types in the brainBenjamin D Harris, Megan Crow, Stephan Fischer, et al.Plos Biology|July 19, 2021
Assessing the replicability of spatial gene expression using atlas data from the adult mouse brainShaina Lu, Cantin Ortiz, Daniel Fürth, et al.Briefings in Bioinformatics|December 22, 2022
Learning single-cell chromatin accessibility profiles using meta-analytic marker genesRisa Karakida Kawaguchi, Ziqi Tang, Stephan Fischer, et al.Nature Neuroscience|May 11, 2021
Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projectionsYu-Chi Sun, Xiaoyin Chen, Stephan Fischer, et al.Nature|April 24, 2024
Whole-cortex in situ sequencing reveals input-dependent area identityXiaoyin Chen, Stephan Fischer, Mara C P Rue, et al.BMC Bioinformatics|May 1, 2013
Characterizing the state of the art in the computational assignment of gene function: lessons from the first critical assessment of functional annotation (CAFA)Jesse Gillis, Paul PavlidisPageof 16