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Journal of Virology|October 1, 2010
RNA structures facilitate recombination-mediated gene swapping in HIV-1Etienne Simon-Loriere, Darren P Martin, Kevin M Weeks, et al.Nature Methods|April 17, 2012
Three-dimensional RNA structure refinement by hydroxyl radical probingFeng Ding, Christopher A Lavender, Kevin M Weeks, et al.Biorxiv : the Preprint Server for Biology|February 6, 2026
Programmed Double-stranded RNA Formation Enables Meiotic Stage TransitionsHao Wu, Xinan Liu, Yihan Xiong, et al.RNA (New York, N.Y.)|December 11, 2024
Protein binding in an mRNA 5'-UTR sterically hinders translationSimon Felder, Irma M Nelson, Breanne M Hatfield, et al.Plos Computational Biology|December 14, 2021
Identifying proximal RNA interactions from cDNA-encoded crosslinks with ShapeJumperThomas W Christy, Catherine A Giannetti, Alain Laederach, et al.Biochemistry|June 16, 2010
Robust and generic RNA modeling using inferred constraints: a structure for the hepatitis C virus IRES pseudoknot domainChristopher A Lavender, Feng Ding, Nikolay V Dokholyan, et al.RNA (New York, N.Y.)|November 29, 2012
QuShape: rapid, accurate, and best-practices quantification of nucleic acid probing information, resolved by capillary electrophoresisFethullah Karabiber, Jennifer L McGinnis, Oleg V Favorov, et al.RNA (New York, N.Y.)|November 3, 2016
Direct identification of base-paired RNA nucleotides by correlated chemical probingAndrey Krokhotin, Anthony M Mustoe, Kevin M Weeks, et al.Journal of the American Chemical Society|March 24, 2005
RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE)Edward J Merino, Kevin A Wilkinson, Jennifer L Coughlan, et al.Proceedings of the National Academy of Sciences of the United States of America|December 26, 2008
Accurate SHAPE-directed RNA structure determinationKatherine E Deigan, Tian W Li, David H Mathews, et al.Pageof 17