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Journal of Visualized Experiments : Jove|January 27, 2025
A Clinical Metaproteomics Workflow Implemented within Galaxy Bioinformatics Platform to Analyze Host-Microbiome Interactions Underlying Human DiseaseKatherine Do, Subina Mehta, Reid Wagner, et al.Methods in Molecular Biology (Clifton, N.J.)|June 28, 2024
Metaproteomics for Coinfections in the Upper Respiratory Tract: The Case of COVID-19Surbhi Bihani, Aryan Gupta, Subina Mehta, et al.Gigascience|April 3, 2020
Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and explorationThomas McGowan, James E Johnson, Praveen Kumar, et al.Journal of Proteome Research|December 4, 2019
Challenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring HitsShane L Hubler, Praveen Kumar, Subina Mehta, et al.Journal of Proteome Research|December 5, 2018
Update on the moFF Algorithm for Label-Free Quantitative ProteomicsAndrea Argentini, An Staes, Björn Grüning, et al.Journal of Proteome Research|May 13, 2020
A Sectioning and Database Enrichment Approach for Improved Peptide Spectrum Matching in Large, Genome-Guided Protein Sequence DatabasesPraveen Kumar, James E Johnson, Caleb Easterly, et al.Methods in Molecular Biology (Clifton, N.J.)|April 14, 2019
The Galaxy Platform for Reproducible Affinity Proteomic Mass Spectrometry Data AnalysisPaul A Stewart, Brent M Kuenzi, Subina Mehta, et al.Journal of Proteome Research|July 14, 2023
Metaproteomic Analysis of Nasopharyngeal Swab Samples to Identify Microbial Peptides in COVID-19 PatientsSurbhi Bihani, Aryan Gupta, Subina Mehta, et al.Clinical Proteomics|May 11, 2021
A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19)Andrew T Rajczewski, Subina Mehta, Dinh Duy An Nguyen, et al.Methods in Molecular Biology (Clifton, N.J.)|October 22, 2024
Discovering Novel Proteoforms Using Proteogenomic Workflows Within the Galaxy Bioinformatics PlatformPraveen Kumar, James E Johnson, Thomas McGowan, et al.Pageof 5