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Biorxiv : the Preprint Server for Biology
|
October 10, 2024
Unified Sampling and Ranking for Protein Docking with DFMDock
Lee-Shin Chu, Sudeep Sarma, Jeffrey J Gray
Journal of Chromatography. A
|
March 18, 2022
De novo discovery of peptide-based affinity ligands for the fab fragment of human immunoglobulin G
Xingqing Xiao, Ryan Kilgore, Sudeep Sarma, et al.
The Journal of Physical Chemistry. B
|
October 11, 2022
Computational Design and Experimental Validation of ACE2-Derived Peptides as SARS-CoV-2 Receptor Binding Domain Inhibitors
Sudeep Sarma, Stephanie M Herrera, Xingqing Xiao, et al.
ACS Chemical Biology
|
December 29, 2021
<i>In Silico</i> Identification and Experimental Validation of Peptide-Based Inhibitors Targeting <i>Clostridium difficile</i> Toxin A
Xingqing Xiao, Sudeep Sarma, Stefano Menegatti, et al.
Biorxiv : the Preprint Server for Biology
|
December 15, 2025
Can We Extract Physics-like Energies from Generative Protein Diffusion Models?
Sudeep Sarma, Harrison Truscott, Da Xu, et al.
Biosensors & Bioelectronics
|
March 8, 2026
Designed peptides as affinity ligands for extracellular-vesicle-based cancer diagnosis
Sudeep Sarma, Jin-Ho Park, Young Kwan Cho, et al.
Biorxiv : the Preprint Server for Biology
|
January 30, 2023
Design of 8-mer Peptides that Block <i>Clostridioides difficile</i> Toxin A in Intestinal Cells
Sudeep Sarma, Carly M Catella, Ellyce T San Pedro, et al.
Proteins
|
September 22, 2025
Docking With Rosetta and Deep Learning Approaches in CAPRI Rounds 47-55
Ameya Harmalkar, Lee-Shin Chu, Samuel W Canner, et al.
Communications Biology
|
August 26, 2023
Design of 8-mer peptides that block Clostridioides difficile toxin A in intestinal cells
Sudeep Sarma, Carly M Catella, Ellyce T San Pedro, et al.
Protein Science : a Publication of the Protein Society
|
July 22, 2024
Design of parallel 𝛽-sheet nanofibrils using Monte Carlo search, coarse-grained simulations, and experimental testing
Sudeep Sarma, Tarunya Rao Sudarshan, Van Nguyen, et al.
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Showing results (1-10 of 12) with videos related to
Sort By:
Page
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Biorxiv : the Preprint Server for Biology
|
October 10, 2024
Unified Sampling and Ranking for Protein Docking with DFMDock
Lee-Shin Chu, Sudeep Sarma, Jeffrey J Gray
Journal of Chromatography. A
|
March 18, 2022
De novo discovery of peptide-based affinity ligands for the fab fragment of human immunoglobulin G
Xingqing Xiao, Ryan Kilgore, Sudeep Sarma, et al.
The Journal of Physical Chemistry. B
|
October 11, 2022
Computational Design and Experimental Validation of ACE2-Derived Peptides as SARS-CoV-2 Receptor Binding Domain Inhibitors
Sudeep Sarma, Stephanie M Herrera, Xingqing Xiao, et al.
ACS Chemical Biology
|
December 29, 2021
<i>In Silico</i> Identification and Experimental Validation of Peptide-Based Inhibitors Targeting <i>Clostridium difficile</i> Toxin A
Xingqing Xiao, Sudeep Sarma, Stefano Menegatti, et al.
Biorxiv : the Preprint Server for Biology
|
December 15, 2025
Can We Extract Physics-like Energies from Generative Protein Diffusion Models?
Sudeep Sarma, Harrison Truscott, Da Xu, et al.
Biosensors & Bioelectronics
|
March 8, 2026
Designed peptides as affinity ligands for extracellular-vesicle-based cancer diagnosis
Sudeep Sarma, Jin-Ho Park, Young Kwan Cho, et al.
Biorxiv : the Preprint Server for Biology
|
January 30, 2023
Design of 8-mer Peptides that Block <i>Clostridioides difficile</i> Toxin A in Intestinal Cells
Sudeep Sarma, Carly M Catella, Ellyce T San Pedro, et al.
Proteins
|
September 22, 2025
Docking With Rosetta and Deep Learning Approaches in CAPRI Rounds 47-55
Ameya Harmalkar, Lee-Shin Chu, Samuel W Canner, et al.
Communications Biology
|
August 26, 2023
Design of 8-mer peptides that block Clostridioides difficile toxin A in intestinal cells
Sudeep Sarma, Carly M Catella, Ellyce T San Pedro, et al.
Protein Science : a Publication of the Protein Society
|
July 22, 2024
Design of parallel 𝛽-sheet nanofibrils using Monte Carlo search, coarse-grained simulations, and experimental testing
Sudeep Sarma, Tarunya Rao Sudarshan, Van Nguyen, et al.
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