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Plos One|September 25, 2025
A graph neural network-based approach for predicting SARS-CoV-2-human protein interactions from multiview dataSumanta Ray, Syed Alberuni, Alexander SchönhuthPlos One|December 16, 2025
Correction: A graph neural network-based approach for predicting SARS-CoV-2-human protein interactions from multiview dataSumanta Ray, Syed Alberuni, Alexander SchönhuthPlos One|December 12, 2024
Integration of biological data via NMF for identification of human disease-associated gene modules through multi-label classificationSyed Alberuni, Sumanta RayIEEE Transactions on Nanobioscience|March 24, 2018
Computational Prediction of HCV-Human Protein-Protein Interaction via Topological Analysis of HCV Infected PPI ModulesSumanta Ray, Syed Alberuni, Ujjwal MaulikArtificial Intelligence in Medicine|December 3, 2022
Deep variational graph autoencoders for novel host-directed therapy options against COVID-19Sumanta Ray, Snehalika Lall, Anirban Mukhopadhyay, et al.Computers in Biology and Medicine|July 3, 2025
Genetic features for drug responses in cancer - Investigating an ensemble-feature-selection approachJohannes Schlüter, Alexander SchönhuthBioinformatics (Oxford, England)|April 18, 2019
Overlap graph-based generation of haplotigs for diploids and polyploidsJasmijn A Baaijens, Alexander SchönhuthBMC Bioinformatics|March 10, 2016
A NMF based approach for integrating multiple data sources to predict HIV-1-human PPIsSumanta Ray, Sanghamitra BandyopadhyayIEEE/ACM Transactions on Computational Biology and Bioinformatics|December 29, 2016
Discovering Perturbation of Modular Structure in HIV Progression by Integrating Multiple Data Sources Through Non-Negative Matrix FactorizationSumanta Ray, Ujjwal MaulikFrontiers in Genetics|May 2, 2022
A Regularized Multi-Task Learning Approach for Cell Type Detection in Single-Cell RNA Sequencing DataPiu Upadhyay, Sumanta RayPageof 9