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Biorxiv : the Preprint Server for Biology|March 10, 2025
To pack or not to pack: revisiting protein side-chain packing in the post-AlphaFold eraSriniketh Vangaru, Debswapna BhattacharyaJournal of Chemical Information and Modeling|July 13, 2026
ORIGAMI: Orientation-Aware Graph Neural Network for Assessing Multimeric Interfaces of Protein Complex StructuresXinyu Wang, Debswapna BhattacharyaScientific Reports|November 7, 2015
De novo protein conformational sampling using a probabilistic graphical modelDebswapna Bhattacharya, Jianlin ChengBriefings in Bioinformatics|June 25, 2025
To pack or not to pack: revisiting protein side-chain packing in the post-AlphaFold eraSriniketh Vangaru, Debswapna BhattacharyaScientific Reports|February 21, 2020
Evaluating the significance of contact maps in low-homology protein modeling using contact-assisted threadingSutanu Bhattacharya, Debswapna BhattacharyaProteins|March 19, 2019
Does inclusion of residue-residue contact information boost protein threading?Sutanu Bhattacharya, Debswapna BhattacharyaComputational and Structural Biotechnology Journal|January 24, 2025
EquiRank: Improved protein-protein interface quality estimation using protein language-model-informed equivariant graph neural networksMd Hossain Shuvo, Debswapna BhattacharyaBioinformatics (Oxford, England)|June 5, 2016
UniCon3D: de novo protein structure prediction using united-residue conformational search via stepwise, probabilistic samplingDebswapna Bhattacharya, Renzhi Cao, Jianlin ChengPlos Computational Biology|February 23, 2021
Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteinsRahmatullah Roche, Sutanu Bhattacharya, Debswapna BhattacharyaProceedings of the National Academy of Sciences of the United States of America|July 31, 2023
The transformative power of transformers in protein structure predictionBernard Moussad, Rahmatullah Roche, Debswapna BhattacharyaPageof 6