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BMC Bioinformatics|December 7, 2016
DeepQA: improving the estimation of single protein model quality with deep belief networksRenzhi Cao, Debswapna Bhattacharya, Jie Hou, et al.Frontiers in Molecular Biosciences|May 28, 2021
Recent Advances in Protein Homology Detection Propelled by Inter-Residue Interaction Map ThreadingSutanu Bhattacharya, Rahmatullah Roche, Md Hossain Shuvo, et al.Bioinformatics Advances|June 23, 2023
PIQLE: protein-protein interface quality estimation by deep graph learning of multimeric interaction geometriesMd Hossain Shuvo, Mohimenul Karim, Rahmatullah Roche, et al.Proteins|September 16, 2015
Massive integration of diverse protein quality assessment methods to improve template based modeling in CASP11Renzhi Cao, Debswapna Bhattacharya, Badri Adhikari, et al.Bioinformatics (Oxford, England)|June 22, 2022
Figbird: a probabilistic method for filling gaps in genome assembliesSumit Tarafder, Mazharul Islam, Swakkhar Shatabda, et al.Proteins|June 25, 2022
rrQNet: Protein contact map quality estimation by deep evolutionary reconciliationRahmatullah Roche, Sutanu Bhattacharya, Md Hossain Shuvo, et al.Plos One|December 3, 2020
PolyFold: An interactive visual simulator for distance-based protein foldingAndrew J McGehee, Sutanu Bhattacharya, Rahmatullah Roche, et al.Biorxiv : the Preprint Server for Biology|February 24, 2023
PIQLE: protein-protein interface quality estimation by deep graph learning of multimeric interaction geometriesMd Hossain Shuvo, Mohimenul Karim, Rahmatullah Roche, et al.Plos Computational Biology|August 31, 2023
E(3) equivariant graph neural networks for robust and accurate protein-protein interaction site predictionRahmatullah Roche, Bernard Moussad, Md Hossain Shuvo, et al.Bioinformatics (Oxford, England)|June 15, 2015
Large-scale model quality assessment for improving protein tertiary structure predictionRenzhi Cao, Debswapna Bhattacharya, Badri Adhikari, et al.Pageof 6