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International Journal of Molecular Sciences|January 8, 2023
Learning in Transcriptional Network Models: Computational Discovery of Pathway-Level Memory and Effective InterventionsSurama Biswas, Wesley Clawson, Michael Levin
Iscience|March 22, 2021
Gene regulatory networks exhibit several kinds of memory: quantification of memory in biological and random transcriptional networksSurama Biswas, Santosh Manicka, Erik Hoel, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|July 11, 2018
A Bi-Objective RNN Model to Reconstruct Gene Regulatory Network: A Modified Multi-Objective Simulated Annealing ApproachSurama Biswas, Sriyankar Acharyya
Theory in Biosciences = Theorie in Den Biowissenschaften|April 7, 2016
Neural model of gene regulatory network: a survey on supportive meta-heuristicsSurama Biswas, Sriyankar Acharyya
IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 10, 2020
Multi-objective Simulated Annealing Variants to Infer Gene Regulatory Network: A Comparative StudySurama Biswas, Sriyankar Acharyya
Interdisciplinary Sciences, Computational Life Sciences|December 3, 2017
Identification of Disease Critical Genes Using Collective Meta-heuristic Approaches: An Application to PreeclampsiaSurama Biswas, Subarna Dutta, Sriyankar Acharyya
Biochemical Genetics|December 6, 2024
A New Differential Gene Expression Based Simulated Annealing for Solving Gene Selection Problem: A Case Study on Eosinophilic Esophagitis and Few Other Gastro-intestinal DiseasesKoushiki Sinha, Sanchari Chakraborty, Arohit Bardhan, et al.
Nature Communications|January 17, 2024
Embryos assist morphogenesis of others through calcium and ATP signaling mechanisms in collective teratogen resistanceAngela Tung, Megan M Sperry, Wesley Clawson, et al.
Biorxiv : the Preprint Server for Biology|August 8, 2025
Triple-Negative Breast Cancer Cells Activate Sensory Neurons via TRPV1 to Drive Nerve Outgrowth and Tumor ProgressionHanan Bloomer, Savannah R Parker, Audrey L Pierce, et al.
Network Neuroscience (Cambridge, Mass.)|February 22, 2021
Dynamic core-periphery structure of information sharing networks in entorhinal cortex and hippocampusNicola Pedreschi, Christophe Bernard, Wesley Clawson, et al.
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