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Bioinformatics (Oxford, England)
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June 29, 2018
An optimization framework for network annotation
Sushant Patkar, Roded Sharan
Plos Computational Biology
|
December 1, 2017
A network diffusion approach to inferring sample-specific function reveals functional changes associated with breast cancer
Sushant Patkar, Assaf Magen, Roded Sharan, et al.
Biorxiv : the Preprint Server for Biology
|
April 29, 2026
OncoBERT: Context-Aware Modeling of Somatic Mutations for Precision Oncology
Sushant Patkar, Noam Auslander, Stephanie Harmon, et al.
Biorxiv : the Preprint Server for Biology
|
August 1, 2025
Towards interpretable molecular and spatial analysis of the tumor microenvironment from digital histopathology images with HistoTME-v2
Sushant Patkar, Timothy R Rosean, Palak Patel, et al.
The American Journal of Pathology
|
October 29, 2022
Deep Domain Adversarial Learning for Species-Agnostic Classification of Histologic Subtypes of Osteosarcoma
Sushant Patkar, Jessica Beck, Stephanie Harmon, et al.
Biorxiv : the Preprint Server for Biology
|
October 9, 2023
Large Scale Comparative Deconvolution Analysis of the Canine and Human Osteosarcoma Tumor Microenvironment Uncovers Conserved Clinically Relevant Subtypes
Sushant Patkar, Josh Mannheimer, Stephanie Harmon, et al.
Biorxiv : the Preprint Server for Biology
|
October 27, 2023
Deactivation of ligand-receptor interactions enhancing lymphocyte infiltration drives melanoma resistance to Immune Checkpoint Blockade
Sahil Sahni, Binbin Wang, Di Wu, et al.
Cancers
|
December 17, 2024
Masked Image Modeling Meets Self-Distillation: A Transformer-Based Prostate Gland Segmentation Framework for Pathology Slides
Haoyue Zhang, Sushant Patkar, Rosina Lis, et al.
Nature Communications
|
October 14, 2024
A machine learning model reveals expansive downregulation of ligand-receptor interactions that enhance lymphocyte infiltration in melanoma with developed resistance to immune checkpoint blockade
Sahil Sahni, Binbin Wang, Di Wu, et al.
Cancer Discovery
|
January 5, 2022
Deconvolving Clinically Relevant Cellular Immune Cross-talk from Bulk Gene Expression Using CODEFACS and LIRICS Stratifies Patients with Melanoma to Anti-PD-1 Therapy
Kun Wang, Sushant Patkar, Joo Sang Lee, et al.
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Search research articles
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Showing results (1-10 of 24) with videos related to
Sort By:
Page
of 3
Bioinformatics (Oxford, England)
|
June 29, 2018
An optimization framework for network annotation
Sushant Patkar, Roded Sharan
Plos Computational Biology
|
December 1, 2017
A network diffusion approach to inferring sample-specific function reveals functional changes associated with breast cancer
Sushant Patkar, Assaf Magen, Roded Sharan, et al.
Biorxiv : the Preprint Server for Biology
|
April 29, 2026
OncoBERT: Context-Aware Modeling of Somatic Mutations for Precision Oncology
Sushant Patkar, Noam Auslander, Stephanie Harmon, et al.
Biorxiv : the Preprint Server for Biology
|
August 1, 2025
Towards interpretable molecular and spatial analysis of the tumor microenvironment from digital histopathology images with HistoTME-v2
Sushant Patkar, Timothy R Rosean, Palak Patel, et al.
The American Journal of Pathology
|
October 29, 2022
Deep Domain Adversarial Learning for Species-Agnostic Classification of Histologic Subtypes of Osteosarcoma
Sushant Patkar, Jessica Beck, Stephanie Harmon, et al.
Biorxiv : the Preprint Server for Biology
|
October 9, 2023
Large Scale Comparative Deconvolution Analysis of the Canine and Human Osteosarcoma Tumor Microenvironment Uncovers Conserved Clinically Relevant Subtypes
Sushant Patkar, Josh Mannheimer, Stephanie Harmon, et al.
Biorxiv : the Preprint Server for Biology
|
October 27, 2023
Deactivation of ligand-receptor interactions enhancing lymphocyte infiltration drives melanoma resistance to Immune Checkpoint Blockade
Sahil Sahni, Binbin Wang, Di Wu, et al.
Cancers
|
December 17, 2024
Masked Image Modeling Meets Self-Distillation: A Transformer-Based Prostate Gland Segmentation Framework for Pathology Slides
Haoyue Zhang, Sushant Patkar, Rosina Lis, et al.
Nature Communications
|
October 14, 2024
A machine learning model reveals expansive downregulation of ligand-receptor interactions that enhance lymphocyte infiltration in melanoma with developed resistance to immune checkpoint blockade
Sahil Sahni, Binbin Wang, Di Wu, et al.
Cancer Discovery
|
January 5, 2022
Deconvolving Clinically Relevant Cellular Immune Cross-talk from Bulk Gene Expression Using CODEFACS and LIRICS Stratifies Patients with Melanoma to Anti-PD-1 Therapy
Kun Wang, Sushant Patkar, Joo Sang Lee, et al.
Page
of 3