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Bioinformatics Advances
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July 8, 2025
Perspective on recent developments and challenges in regulatory and systems genomics
Julia Zeitlinger, Sushmita Roy, Ferhat Ay, et al.
Cytotherapy
|
November 6, 2023
Human left ventricular cardiac fibroblasts undergo a dynamic shift in secretome and gene expression toward a cardiac myofibroblast phenotype during early passage in typical culture expansion conditions
Eric G Schmuck, Sushmita Roy, Tianhua Zhou, et al.
Genome Research
|
March 30, 2012
Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks
Daniel Marbach, Sushmita Roy, Ferhat Ay, et al.
G3 (Bethesda, Md.)
|
January 10, 2023
Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq data
Sunnie Grace McCalla, Alireza Fotuhi Siahpirani, Jiaxin Li, et al.
Cell Reports
|
December 5, 2019
Metabolic Rewiring in Response to Biguanides Is Mediated by mROS/HIF-1a in Malignant Lymphocytes
Hamidullah Khan, Ashish Anshu, Aman Prasad, et al.
Nature Communications
|
May 27, 2023
Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasets
Shilu Zhang, Saptarshi Pyne, Stefan Pietrzak, et al.
F1000Research
|
March 13, 2018
Evaluation of antibiotic susceptibility in wound infections: A pilot study from Bangladesh
Sushmita Roy, Mejbah Uddin Ahmed, Bhuiyan Mohammad Mahtab Uddin, et al.
Plos Computational Biology
|
July 10, 2023
Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation
Brittany Baur, Junha Shin, Jacob Schreiber, et al.
Genome Research
|
May 4, 2013
Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules
Sushmita Roy, Ilan Wapinski, Jenna Pfiffner, et al.
Nature Communications
|
February 5, 2015
Collaborative rewiring of the pluripotency network by chromatin and signalling modulating pathways
Khoa A Tran, Steven A Jackson, Zachariah P G Olufs, et al.
Page
of 13
Search research articles
Search
Showing results (61-70 of 124) with videos related to
Sort By:
Page
of 13
Bioinformatics Advances
|
July 8, 2025
Perspective on recent developments and challenges in regulatory and systems genomics
Julia Zeitlinger, Sushmita Roy, Ferhat Ay, et al.
Cytotherapy
|
November 6, 2023
Human left ventricular cardiac fibroblasts undergo a dynamic shift in secretome and gene expression toward a cardiac myofibroblast phenotype during early passage in typical culture expansion conditions
Eric G Schmuck, Sushmita Roy, Tianhua Zhou, et al.
Genome Research
|
March 30, 2012
Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks
Daniel Marbach, Sushmita Roy, Ferhat Ay, et al.
G3 (Bethesda, Md.)
|
January 10, 2023
Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq data
Sunnie Grace McCalla, Alireza Fotuhi Siahpirani, Jiaxin Li, et al.
Cell Reports
|
December 5, 2019
Metabolic Rewiring in Response to Biguanides Is Mediated by mROS/HIF-1a in Malignant Lymphocytes
Hamidullah Khan, Ashish Anshu, Aman Prasad, et al.
Nature Communications
|
May 27, 2023
Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasets
Shilu Zhang, Saptarshi Pyne, Stefan Pietrzak, et al.
F1000Research
|
March 13, 2018
Evaluation of antibiotic susceptibility in wound infections: A pilot study from Bangladesh
Sushmita Roy, Mejbah Uddin Ahmed, Bhuiyan Mohammad Mahtab Uddin, et al.
Plos Computational Biology
|
July 10, 2023
Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation
Brittany Baur, Junha Shin, Jacob Schreiber, et al.
Genome Research
|
May 4, 2013
Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules
Sushmita Roy, Ilan Wapinski, Jenna Pfiffner, et al.
Nature Communications
|
February 5, 2015
Collaborative rewiring of the pluripotency network by chromatin and signalling modulating pathways
Khoa A Tran, Steven A Jackson, Zachariah P G Olufs, et al.
Page
of 13