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Cell|February 25, 2017
Impacts of Neanderthal-Introgressed Sequences on the Landscape of Human Gene ExpressionRajiv C McCoy, Jon Wakefield, Joshua M AkeyPlos Genetics|July 4, 2014
Evolution and genetic architecture of chromatin accessibility and function in yeastCaitlin F Connelly, Jon Wakefield, Joshua M AkeyBiorxiv : the Preprint Server for Biology|September 5, 2025
MutagenesisForge: A Framework for Modeling Codon-Level Mutational Biases and Calculating dN/dSCooper Koers, Rob Bierman, Huixin Xu, et al.Molecular Biology and Evolution|February 25, 2003
The effect of single nucleotide polymorphism identification strategies on estimates of linkage disequilibriumJoshua M Akey, Kun Zhang, Momiao Xiong, et al.Genome Research|September 6, 2005
Fitting background-selection predictions to levels of nucleotide variation and divergence along the human autosomesFloyd A Reed, Joshua M Akey, Charles F AquadroProceedings of the National Academy of Sciences of the United States of America|March 16, 2007
Adaptive evolution in humans revealed by the negative correlation between the polymorphism and fixation phases of evolutionJun Gojobori, Hua Tang, Joshua M Akey, et al.Genomics|October 12, 2002
Assaying DNA methylation based on high-throughput melting curve approachesDayna T Akey, Joshua M Akey, Kun Zhang, et al.Virology|June 13, 2013
Identification and antiviral activity of common polymorphisms in the APOBEC3 locus in human populationsNisha K Duggal, Wenqing Fu, Joshua M Akey, et al.Human Molecular Genetics|August 9, 2014
Global and disease-associated genetic variation in the human Fanconi anemia gene familyKai J Rogers, Wenqing Fu, Joshua M Akey, et al.Genetics|October 13, 2016
Detecting Sources of Transcriptional Heterogeneity in Large-Scale RNA-Seq Data SetsBrian C Searle, Rachel M Gittelman, Ohad Manor, et al.Pageof 13