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Protein and Peptide Letters|August 3, 2010
Antimicrobial and cell-penetrating peptides: structure, assembly and mechanisms of membrane lysis via atomistic and coarse-grained molecular dynamics simulationsPeter J Bond, Syma KhalidMethods in Molecular Biology (Clifton, N.J.)|October 5, 2012
Multiscale molecular dynamics simulations of membrane proteinsSyma Khalid, Peter J BondBiochimica Et Biophysica Acta|March 1, 2011
Exploring the conformational dynamics and membrane interactions of PorB from C. glutamicum: a multi-scale molecular dynamics simulation studyÁngel Piñeiro, Peter J Bond, Syma KhalidMicrobiology (Reading, England)|March 16, 2022
What have molecular simulations contributed to understanding of Gram-negative bacterial cell envelopes?Syma Khalid, Cyril Schroeder, Peter J Bond, et al.The Journal of Chemical Physics|August 6, 2020
Molecular dynamics simulations of bacterial outer membrane lipid extraction: Adequate sampling?Jonathan Shearer, Jan K Marzinek, Peter J Bond, et al.Biophysical Journal|July 16, 2008
Self-assembly of a simple membrane protein: coarse-grained molecular dynamics simulations of the influenza M2 channelTimothy Carpenter, Peter J Bond, Syma Khalid, et al.Biochimica Et Biophysica Acta|July 3, 2007
OmpA: gating and dynamics via molecular dynamics simulationsSyma Khalid, Peter J Bond, Timothy Carpenter, et al.The Journal of Physical Chemistry Letters|May 4, 2017
Progress in Molecular Dynamics Simulations of Gram-Negative Bacterial Cell EnvelopesAlister Boags, Pin-Chia Hsu, Firdaus Samsudin, et al.Proteins|January 7, 2006
Modeling and simulations of a bacterial outer membrane protein: OprF from Pseudomonas aeruginosaSyma Khalid, Peter J Bond, Sundeep S Deol, et al.Methods in Molecular Biology (Clifton, N.J.)|February 14, 2013
The simulation approach to lipid-protein interactionsTeresa Paramo, Diana Garzón, Daniel A Holdbrook, et al.Pageof 29