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Analytical Chemistry|February 17, 2022
Improved Identification of Proteoforms in Top-Down Proteomics Using FAIMS with Internal CV SteppingPhilipp T Kaulich, Liam Cassidy, Konrad Winkels, et al.Nature Protocols|January 17, 2025
PEPPI-MS: gel-based sample pre-fractionation for deep top-down and middle-down proteomicsAyako Takemori, Philipp T Kaulich, Andreas Tholey, et al.Journal of Proteome Research|August 16, 2022
Validation of Top-Down Proteomics Data by Bottom-Up-Based N-Terminomics Reveals Pitfalls in Top-Down-Based Terminomics WorkflowsKonrad Winkels, Tomas Koudelka, Philipp T Kaulich, et al.Analytical Chemistry|October 17, 2025
Selective Comprehensive Online NanoLCxCZE-MS Platform for Top-Down Proteoform AnalysisTobias Waldmann, Philipp T Kaulich, Alexander Stolz, et al.Analytical Chemistry|September 7, 2022
Size-Based Proteome Fractionation through Polyacrylamide Gel Electrophoresis Combined with LC-FAIMS-MS for In-Depth Top-Down ProteomicsAyako Takemori, Philipp T Kaulich, Liam Cassidy, et al.Journal of Proteome Research|March 24, 2021
Multi-protease Approach for the Improved Identification and Molecular Characterization of Small Proteins and Short Open Reading Frame-Encoded PeptidesPhilipp T Kaulich, Liam Cassidy, Jürgen Bartel, et al.Proteomics|July 16, 2020
Complementarity of Different SDS-PAGE Gel Staining Methods for the Identification of Short Open Reading Frame-Encoded PeptidesPhilipp T Kaulich, Liam Cassidy, Katrin Weidenbach, et al.Proteomics|June 19, 2021
Bottom-up and top-down proteomic approaches for the identification, characterization, and quantification of the low molecular weight proteome with focus on short open reading frame-encoded peptidesLiam Cassidy, Philipp T Kaulich, Sandra Maaß, et al.Analytical Chemistry|October 18, 2024
FLASHQuant: A Fast Algorithm for Proteoform Quantification in Top-Down ProteomicsJihyung Kim, Kyowon Jeong, Philipp T Kaulich, et al.Proteomics|November 24, 2023
Precursor deconvolution error estimation: The missing puzzle piece in false discovery rate in top-down proteomicsKyowon Jeong, Philipp T Kaulich, Wonhyeuk Jung, et al.Pageof 3