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Gigascience|February 17, 2025
xRead: a coverage-guided approach for scalable construction of read overlapping graphTangchao Kong, Yadong Wang, Bo LiuBioinformatics (Oxford, England)|June 17, 2016
deBWT: parallel construction of Burrows-Wheeler Transform for large collection of genomes with de Bruijn-branch encodingBo Liu, Dixian Zhu, Yadong WangBMC Bioinformatics|August 26, 2021
Fast and SNP-aware short read alignment with SALTWei Quan, Bo Liu, Yadong WangBioinformatics (Oxford, England)|September 27, 2016
LAMSA: fast split read alignment with long approximate matchesBo Liu, Yan Gao, Yadong WangBioinformatics (Oxford, England)|November 17, 2015
rHAT: fast alignment of noisy long reads with regional hashingBo Liu, Dengfeng Guan, Mingxiang Teng, et al.Bioinformatics (Oxford, England)|September 13, 2019
TideHunter: efficient and sensitive tandem repeat detection from noisy long-reads using seed-and-chainYan Gao, Bo Liu, Yadong Wang, et al.Bioinformatics (Oxford, England)|July 6, 2016
deBGA: read alignment with de Bruijn graph-based seed and extensionBo Liu, Hongzhe Guo, Michael Brudno, et al.IEEE Transactions on Nanobioscience|April 5, 2019
Long-Read Based Novel Sequence Insertion Detection With rCANIDTao Jiang, Yilei Fu, Bo Liu, et al.Plos One|July 5, 2013
Modeling exon expression using histone modificationsShijia Zhu, Guohua Wang, Bo Liu, et al.Bioinformatics (Oxford, England)|February 14, 2019
rMETL: sensitive mobile element insertion detection with long read realignmentTao Jiang, Bo Liu, Junyi Li, et al.Pageof 933