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Biorxiv : the Preprint Server for Biology|August 1, 2026
FERRET: Framework to Evaluate Robustness in Regulatory Networks Using Heterogeneous Cell TypesTara Eicher, John Quackenbush
Biorxiv : the Preprint Server for Biology|June 12, 2026
Genomic, Transcriptomic, and Regulomic Analyses Do Not Support Profound Autism as a Distinct Biological CategoryTara Eicher, Ari Ne'eman, John Quackenbush
Biorxiv : the Preprint Server for Biology|April 8, 2025
BLOBFISH: Bipartite Limited Subnetworks from Multiple Observations using Breadth-First Search with Constrained HopsTara Eicher, Marouen Ben Guebila, John Quackenbush
Science (New York, N.Y.)|October 11, 2003
Genomics. Microarrays--guilt by associationJohn Quackenbush
Toxicology and Applied Pharmacology|July 9, 2005
Extracting meaning from functional genomics experimentsJohn Quackenbush
The Journal of Experimental Biology|April 24, 2007
Extracting biology from high-dimensional biological dataJohn Quackenbush
Nature Genetics|November 28, 2002
Microarray data normalization and transformationJohn Quackenbush
Genome Biology|September 4, 2003
Open-source software accelerates bioinformaticsJohn Quackenbush
Genome Medicine|November 27, 2009
Data reporting standards: making the things we use betterJohn Quackenbush
Medrxiv : the Preprint Server for Health Sciences|February 6, 2026
Gene regulatory network analysis identifies dysregulation of hypoxia pathways as contributing to glioblastoma multiforme treatment resistance in femalesTomisin Adebari, Viola Fanfani, Marouen Ben Guebila, et al.
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