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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 1, 2013
An improved satisfiability algorithm for nested canalyzing functions and its application to determining a singleton attractor of a Boolean networkAvraham A Melkman, Tatsuya AkutsuIEEE Transactions on Neural Networks and Learning Systems|December 25, 2023
On the Size and Width of the Decoder of a Boolean Threshold AutoencoderTatsuya Akutsu, Avraham A MelkmanIEEE Transactions on Neural Networks and Learning Systems|December 25, 2018
Identification of the Structure of a Probabilistic Boolean Network From Samples Including Frequencies of OutcomesTatsuya Akutsu, Avraham A MelkmanNeural Networks : the Official Journal of the International Neural Network Society|April 12, 2020
Extracting boolean and probabilistic rules from trained neural networksPengyu Liu, Avraham A Melkman, Tatsuya AkutsuIEEE/ACM Transactions on Computational Biology and Bioinformatics|June 13, 2012
Finding a periodic attractor of a Boolean networkTatsuya Akutsu, Sven Kosub, Avraham A Melkman, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 11, 2011
Determining a singleton attractor of a boolean network with nested canalyzing functionsTatsuya Akutsu, Avraham A Melkman, Takeyuki Tamura, et al.IEEE Transactions on Neural Networks and Learning Systems|January 28, 2017
Identifying a Probabilistic Boolean Threshold Network From SamplesAvraham A Melkman, Xiaoqing Cheng, Wai-Ki Ching, et al.IEEE Transactions on Neural Networks and Learning Systems|August 24, 2021
On the Compressive Power of Boolean Threshold AutoencodersAvraham A Melkman, Sini Guo, Wai-Ki Ching, et al.Bioinformatics (Oxford, England)|November 9, 2007
Hierarchical tree snipping: clustering guided by prior knowledgeDikla Dotan-Cohen, Avraham A Melkman, Simon KasifBioinformatics (Oxford, England)|June 6, 2009
Seeing the forest for the trees: using the Gene Ontology to restructure hierarchical clusteringDikla Dotan-Cohen, Simon Kasif, Avraham A MelkmanPageof 22