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Plos Computational Biology|December 28, 2023
Pneumococcal population dynamics: Investigating vaccine-induced changes through multiscale modellingNicola Mulberry, Alexander R Rutherford, Caroline ColijnThe Lancet. Public Health|March 25, 2021
Incidence and prevalence of tuberculosis in incarcerated populations: a systematic review and meta-analysisOlivia Cords, Leonardo Martinez, Joshua L Warren, et al.Plos Computational Biology|December 4, 2024
Measuring genetic diversity across populationsNiloufar Abhari, Caroline Colijn, Arne Mooers, et al.Journal of Mathematical Biology|August 10, 2006
High frequency spikes in long period blood cell oscillationsCaroline Colijn, A C Fowler, Michael C MackeyJournal of Theoretical Biology|December 7, 2023
Capturing diversity: Split systems and circular approximations for conservationNiloufar Abhari, Caroline Colijn, Arne Mooers, et al.Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|August 22, 2022
Deep clustering of bacterial tree imagesMaryam Hayati, Leonid Chindelevitch, David Aanensen, et al.Nature Communications|May 11, 2026
SAASI: Sampling Aware Ancestral State InferenceYexuan Song, Ivan Gill, Ailene MacPherson, et al.Journal of the Royal Society, Interface|April 28, 2021
Modelling the impact of household size distribution on the transmission dynamics of COVID-19Pengyu Liu, Lisa McQuarrie, Yexuan Song, et al.Proceedings of the National Academy of Sciences of the United States of America|November 20, 2020
Event-specific interventions to minimize COVID-19 transmissionPaul Tupper, Himani Boury, Madi Yerlanov, et al.Plos Computational Biology|February 27, 2019
Phylogenies from dynamic networksCornelia Metzig, Oliver Ratmann, Daniela Bezemer, et al.Pageof 56