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Biorxiv : the Preprint Server for Biology|August 6, 2025
Circling in on plasmids: benchmarking plasmid detection and reconstruction tools for short-read data from diverse speciesMarco Teixeira, Celia Souque, Colin J Worby, et al.
Briefings in Bioinformatics|November 11, 2025
Circling in on plasmids: benchmarking plasmid detection and reconstruction tools for short-read data from diverse speciesMarco Teixeira, Célia Souque, Colin J Worby, et al.
Genetics|March 26, 2021
Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida aurisJosé F Muñoz, Rory M Welsh, Terrance Shea, et al.
Plos One|November 20, 2014
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvementBruce J Walker, Thomas Abeel, Terrance Shea, et al.
Plos Neglected Tropical Diseases|January 12, 2016
Whole Genome Sequencing of Mycobacterium africanum Strains from Mali Provides Insights into the Mechanisms of Geographic RestrictionKathryn Winglee, Abigail Manson McGuire, Mamoudou Maiga, et al.
Plos Biology|June 6, 2024
Comparative genomics of the closely related fungal genera Cryptococcus and Kwoniella reveals karyotype dynamics and suggests evolutionary mechanisms of pathogenesisMarco A Coelho, Márcia David-Palma, Terrance Shea, et al.
Biorxiv : the Preprint Server for Biology|January 18, 2024
Comparative genomics of Cryptococcus and Kwoniella reveals pathogenesis evolution and contrasting karyotype dynamics via intercentromeric recombination or chromosome fusionMarco A Coelho, Márcia David-Palma, Terrance Shea, et al.
Elife|June 17, 2022
Obligate sexual reproduction of a homothallic fungus closely related to the Cryptococcus pathogenic species complexAndrew Ryan Passer, Shelly Applen Clancey, Terrance Shea, et al.
Mbio|November 28, 2025
Loss of LafB activity reverses daptomycin resistance in E. faeciumSuelen Scarpa de Mello, Bailey Schultz, Byoungsook Goh, et al.
Frontiers in Nutrition|July 22, 2025
The human milk bacteriome and mycobiome and their inter-kingdom interactions viewed across geographyHaipeng Sun, Brett Finlay, Meghan B Azad, et al.
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