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Frontiers in Molecular Biosciences|April 24, 2023
Multi-omic single cell sequencing: Overview and opportunities for kidney disease therapeutic developmentSteven Pregizer, Thom Vreven, Mohit Mathur, et al.The Journal of Chemical Physics|August 17, 2010
Link atom bond length effect in ONIOM excited state calculationsMarco Caricato, Thom Vreven, Gary W Trucks, et al.Proceedings of the National Academy of Sciences of the United States of America|December 13, 2017
Structure-based prediction of ligand-protein interactions on a genome-wide scaleHowook Hwang, Fabian Dey, Donald Petrey, et al.Journal of Chemical Theory and Computation|November 26, 2015
Oscillator Strengths in ONIOM Excited State CalculationsMarco Caricato, Thom Vreven, Gary W Trucks, et al.Journal of Chemical Theory and Computation|November 27, 2015
Transition States in a Protein Environment - ONIOM QM:MM Modeling of Isopenicillin N SynthesisMarcus Lundberg, Tsutomu Kawatsu, Thom Vreven, et al.Journal of Molecular Biology|August 30, 2008
Three-layer ONIOM studies of the dark state of rhodopsin: the protonation state of Glu181Katherine F Hall, Thom Vreven, Michael J Frisch, et al.Journal of Computational Chemistry|April 1, 2003
Geometry optimization with QM/MM, ONIOM, and other combined methods. I. Microiterations and constraintsThom Vreven, Keiji Morokuma, Odön Farkas, et al.The Journal of Physical Chemistry. B|July 11, 2006
Is the protein surrounding the active site critical for hydrogen peroxide reduction by selenoprotein glutathione peroxidase? An ONIOM studyRajeev Prabhakar, Thom Vreven, Michael J Frisch, et al.Proteins|October 28, 2003
Atomic contact vectors in protein-protein recognitionJulian Mintseris, Zhiping WengProteins|April 16, 2003
A novel shape complementarity scoring function for protein-protein dockingRong Chen, Zhiping WengPageof 37