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BMC Bioinformatics|November 19, 2008
RNAalifold: improved consensus structure prediction for RNA alignmentsStephan H Bernhart, Ivo L Hofacker, Sebastian Will, et al.Molecular Biology and Evolution|September 8, 2009
Evolution of 7SK RNA and its protein partners in metazoaManja Marz, Alexander Donath, Nina Verstraete, et al.BMC Bioinformatics|April 30, 2011
Proteinortho: detection of (co-)orthologs in large-scale analysisMarcus Lechner, Sven Findeiss, Lydia Steiner, et al.Bioinformatics (Oxford, England)|November 5, 2011
deepBlockAlign: a tool for aligning RNA-seq profiles of read block patternsDavid Langenberger, Sachin Pundhir, Claus T Ekstrøm, et al.RNA Biology|April 24, 2014
Bioinformatics of prokaryotic RNAsRolf Backofen, Fabian Amman, Fabrizio Costa, et al.Molecular Biology and Evolution|September 16, 2005
The "fish-specific" Hox cluster duplication is coincident with the origin of teleostsKaren D Crow, Peter F Stadler, Vincent J Lynch, et al.RNA (New York, N.Y.)|April 4, 2020
Splicing conservation signals in plant long noncoding RNAsJose Antonio Corona-Gomez, Irving Jair Garcia-Lopez, Peter F Stadler, et al.Journal of Theoretical Biology|November 28, 2017
Temporal ordering of substitutions in RNA evolution: Uncovering the structural evolution of the Human Accelerated Region 1Maria Beatriz Walter Costa, Christian Höner Zu Siederdissen, Dan Tulpan, et al.Algorithms for Molecular Biology : AMB|May 26, 2006
Partition function and base pairing probabilities of RNA heterodimersStephan H Bernhart, Hakim Tafer, Ulrike Mückstein, et al.Molecular Biology and Evolution|June 21, 2008
Arthropod 7SK RNAAndreas R Gruber, Carsten Kilgus, Axel Mosig, et al.Pageof 47