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Nucleic Acids Research|June 25, 2004
The web server of IBM's Bioinformatics and Pattern Discovery group: 2004 updateTien Huynh, Isidore RigoutsosNucleic Acids Research|June 26, 2003
The web server of IBM's Bioinformatics and Pattern Discovery groupTien Huynh, Isidore Rigoutsos, Laxmi Parida, et al.Nucleic Acids Research|August 31, 2002
Dictionary-driven protein annotationIsidore Rigoutsos, Tien Huynh, Aris Floratos, et al.Proceedings of the National Academy of Sciences of the United States of America|April 26, 2006
Short blocks from the noncoding parts of the human genome have instances within nearly all known genes and relate to biological processesIsidore Rigoutsos, Tien Huynh, Kevin Miranda, et al.Cancer Research|April 9, 2009
New tricks for animal microRNAS: targeting of amino acid coding regions at conserved and nonconserved sitesIsidore RigoutsosNucleic Acids Research|June 13, 2002
Dictionary-driven prokaryotic gene findingTetsuo Shibuya, Isidore RigoutsosNucleic Acids Research|July 12, 2005
A sensitive, support-vector-machine method for the detection of horizontal gene transfers in viral, archaeal and bacterial genomesAristotelis Tsirigos, Isidore RigoutsosBiology Direct|January 30, 2015
"Off-Spotter": very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAsVenetia Pliatsika, Isidore RigoutsosPageof 21